Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 MPST-204ENST00000404393 1329 ntTSL 5 BASIC13.31□□□□□ -0.28
HIST1H2BDP58876 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H2BDP58876 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H2BDP58876 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HIST1H2BDP58876 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H2BDP58876 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H2BDP58876 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H2BDP58876 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H2BDP58876 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H2BDP58876 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H2BDP58876 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H2BDP58876 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H2BDP58876 NORAD-201ENST00000565493 5339 ntBASIC13.31□□□□□ -0.28
HIST1H2BDP58876 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 PTMA-205ENST00000410064 814 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
HIST1H2BDP58876 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.3□□□□□ -0.28
HIST1H2BDP58876 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC13.29□□□□□ -0.28
HIST1H2BDP58876 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 HTR7P1-201ENST00000538670 1336 ntBASIC13.29□□□□□ -0.28
HIST1H2BDP58876 AC019069.1-201ENST00000610008 1333 ntBASIC13.29□□□□□ -0.28
HIST1H2BDP58876 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.29□□□□□ -0.28
HIST1H2BDP58876 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 AC046185.3-201ENST00000623228 1824 ntBASIC13.29□□□□□ -0.28
HIST1H2BDP58876 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 AC016396.2-201ENST00000562575 1417 ntBASIC13.29□□□□□ -0.28
HIST1H2BDP58876 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.29□□□□□ -0.28
HIST1H2BDP58876 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms