Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CRYGEP-201ENST00000412192 528 ntBASIC20.79■□□□□ 0.92
RHBDL3P58872 IGLL3P-201ENST00000412472 434 ntBASIC20.79■□□□□ 0.92
RHBDL3P58872 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.79■□□□□ 0.92
RHBDL3P58872 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
RHBDL3P58872 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.79■□□□□ 0.92
RHBDL3P58872 AC092865.6-201ENST00000642101 219 ntBASIC20.79■□□□□ 0.92
RHBDL3P58872 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RHBDL3P58872 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RHBDL3P58872 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RHBDL3P58872 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.79■□□□□ 0.92
RHBDL3P58872 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RHBDL3P58872 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.79■□□□□ 0.92
RHBDL3P58872 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RHBDL3P58872 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RHBDL3P58872 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDL3P58872 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDL3P58872 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDL3P58872 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RHBDL3P58872 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
RHBDL3P58872 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDL3P58872 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDL3P58872 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDL3P58872 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDL3P58872 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
RHBDL3P58872 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDL3P58872 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RHBDL3P58872 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.78■□□□□ 0.92
RHBDL3P58872 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDL3P58872 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDL3P58872 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDL3P58872 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.78■□□□□ 0.92
RHBDL3P58872 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDL3P58872 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDL3P58872 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RHBDL3P58872 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.78■□□□□ 0.92
RHBDL3P58872 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.78■□□□□ 0.92
RHBDL3P58872 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDL3P58872 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.78■□□□□ 0.92
RHBDL3P58872 MIR4751-201ENST00000578027 74 ntBASIC20.78■□□□□ 0.92
RHBDL3P58872 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.78■□□□□ 0.92
RHBDL3P58872 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.78■□□□□ 0.92
RHBDL3P58872 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDL3P58872 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RHBDL3P58872 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDL3P58872 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.78■□□□□ 0.92
RHBDL3P58872 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDL3P58872 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDL3P58872 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RHBDL3P58872 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDL3P58872 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RHBDL3P58872 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RHBDL3P58872 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RHBDL3P58872 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.77■□□□□ 0.92
RHBDL3P58872 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RHBDL3P58872 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RHBDL3P58872 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RHBDL3P58872 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.77■□□□□ 0.92
RHBDL3P58872 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RHBDL3P58872 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RHBDL3P58872 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RHBDL3P58872 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RHBDL3P58872 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RHBDL3P58872 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.77■□□□□ 0.92
RHBDL3P58872 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.77■□□□□ 0.92
RHBDL3P58872 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RHBDL3P58872 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.77■□□□□ 0.92
RHBDL3P58872 DNAJB3-201ENST00000446806 729 ntBASIC20.77■□□□□ 0.92
RHBDL3P58872 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.77■□□□□ 0.92
RHBDL3P58872 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.77■□□□□ 0.92
RHBDL3P58872 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.77■□□□□ 0.92
RHBDL3P58872 AL691403.2-201ENST00000618460 490 ntBASIC20.77■□□□□ 0.92
RHBDL3P58872 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RHBDL3P58872 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.77■□□□□ 0.92
RHBDL3P58872 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RHBDL3P58872 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.77■□□□□ 0.92
RHBDL3P58872 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RHBDL3P58872 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RHBDL3P58872 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.76■□□□□ 0.91
RHBDL3P58872 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.76■□□□□ 0.91
RHBDL3P58872 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RHBDL3P58872 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.76■□□□□ 0.91
RHBDL3P58872 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RHBDL3P58872 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.76■□□□□ 0.91
RHBDL3P58872 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RHBDL3P58872 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RHBDL3P58872 AL354751.1-201ENST00000412768 1863 ntBASIC20.76■□□□□ 0.91
RHBDL3P58872 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RHBDL3P58872 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
RHBDL3P58872 AP002414.1-201ENST00000391405 1147 ntBASIC20.76■□□□□ 0.91
RHBDL3P58872 MCCD1P2-201ENST00000423228 335 ntBASIC20.76■□□□□ 0.91
RHBDL3P58872 ACTG1P4-201ENST00000425123 1122 ntBASIC20.76■□□□□ 0.91
RHBDL3P58872 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RHBDL3P58872 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.76■□□□□ 0.91
RHBDL3P58872 AC018845.2-201ENST00000568326 409 ntBASIC20.76■□□□□ 0.91
RHBDL3P58872 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.76■□□□□ 0.91
RHBDL3P58872 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.76■□□□□ 0.91
RHBDL3P58872 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RHBDL3P58872 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.76■□□□□ 0.91
RHBDL3P58872 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.76■□□□□ 0.91
RHBDL3P58872 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms