Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLDN2P57739 AC138932.1-201ENST00000534164 6830 ntBASIC17.41■□□□□ 0.38
CLDN2P57739 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN2P57739 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN2P57739 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.41■□□□□ 0.38
CLDN2P57739 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN2P57739 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN2P57739 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLDN2P57739 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CLDN2P57739 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN2P57739 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.41■□□□□ 0.38
CLDN2P57739 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.41■□□□□ 0.38
CLDN2P57739 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.41■□□□□ 0.38
CLDN2P57739 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.41■□□□□ 0.38
CLDN2P57739 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.41■□□□□ 0.38
CLDN2P57739 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CLDN2P57739 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN2P57739 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDN2P57739 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CLDN2P57739 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN2P57739 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CLDN2P57739 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CLDN2P57739 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN2P57739 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN2P57739 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLDN2P57739 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN2P57739 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN2P57739 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN2P57739 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CLDN2P57739 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN2P57739 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN2P57739 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLDN2P57739 KLF4P1-201ENST00000412782 1185 ntBASIC17.4■□□□□ 0.38
CLDN2P57739 KRT18P27-201ENST00000427733 1299 ntBASIC17.4■□□□□ 0.38
CLDN2P57739 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN2P57739 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN2P57739 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
CLDN2P57739 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CLDN2P57739 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN2P57739 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLDN2P57739 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 AC139530.3-201ENST00000620344 690 ntBASIC17.4■□□□□ 0.38
CLDN2P57739 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CLDN2P57739 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN2P57739 BX276092.7-203ENST00000637198 1536 ntBASIC17.4■□□□□ 0.38
CLDN2P57739 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CLDN2P57739 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN2P57739 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN2P57739 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLDN2P57739 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN2P57739 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLDN2P57739 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.39■□□□□ 0.38
CLDN2P57739 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CLDN2P57739 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLDN2P57739 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.39■□□□□ 0.38
CLDN2P57739 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.39■□□□□ 0.38
CLDN2P57739 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.39■□□□□ 0.38
CLDN2P57739 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CLDN2P57739 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN2P57739 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN2P57739 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN2P57739 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN2P57739 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN2P57739 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN2P57739 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CLDN2P57739 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN2P57739 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN2P57739 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CLDN2P57739 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN2P57739 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.39■□□□□ 0.37
CLDN2P57739 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN2P57739 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN2P57739 AC073621.1-201ENST00000392730 636 ntBASIC17.39■□□□□ 0.37
CLDN2P57739 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN2P57739 AC007967.2-201ENST00000432613 625 ntBASIC17.39■□□□□ 0.37
CLDN2P57739 AC009947.1-201ENST00000444350 727 ntBASIC17.39■□□□□ 0.37
CLDN2P57739 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
CLDN2P57739 PGAM5P1-201ENST00000518923 814 ntBASIC17.39■□□□□ 0.37
CLDN2P57739 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms