Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN6P56747 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN6P56747 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN6P56747 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.92■□□□□ 0.3
CLDN6P56747 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN6P56747 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN6P56747 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN6P56747 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN6P56747 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN6P56747 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.92■□□□□ 0.3
CLDN6P56747 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN6P56747 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN6P56747 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN6P56747 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN6P56747 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CLDN6P56747 AC132938.5-201ENST00000624980 1813 ntBASIC16.91■□□□□ 0.3
CLDN6P56747 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN6P56747 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN6P56747 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN6P56747 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN6P56747 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN6P56747 AC090340.1-201ENST00000620778 4980 ntBASIC16.91■□□□□ 0.3
CLDN6P56747 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CLDN6P56747 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN6P56747 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN6P56747 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN6P56747 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN6P56747 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN6P56747 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN6P56747 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN6P56747 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN6P56747 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CLDN6P56747 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN6P56747 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CLDN6P56747 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN6P56747 AL020989.1-201ENST00000422979 469 ntBASIC16.91■□□□□ 0.3
CLDN6P56747 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN6P56747 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CLDN6P56747 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.91■□□□□ 0.3
CLDN6P56747 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN6P56747 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN6P56747 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN6P56747 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CLDN6P56747 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN6P56747 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CLDN6P56747 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN6P56747 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN6P56747 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN6P56747 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN6P56747 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CLDN6P56747 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CLDN6P56747 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CLDN6P56747 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN6P56747 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
CLDN6P56747 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN6P56747 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CLDN6P56747 AL139400.1-201ENST00000366220 510 ntBASIC16.9■□□□□ 0.3
CLDN6P56747 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.9■□□□□ 0.3
CLDN6P56747 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN6P56747 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.9■□□□□ 0.3
CLDN6P56747 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.9■□□□□ 0.3
CLDN6P56747 IGHV3-65-201ENST00000523210 341 ntBASIC16.9■□□□□ 0.3
CLDN6P56747 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.9■□□□□ 0.3
CLDN6P56747 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN6P56747 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN6P56747 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.9■□□□□ 0.3
CLDN6P56747 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CLDN6P56747 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.9■□□□□ 0.3
CLDN6P56747 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN6P56747 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN6P56747 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN6P56747 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN6P56747 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN6P56747 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN6P56747 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN6P56747 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN6P56747 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLDN6P56747 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CLDN6P56747 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN6P56747 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN6P56747 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN6P56747 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN6P56747 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN6P56747 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN6P56747 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN6P56747 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.89■□□□□ 0.29
CLDN6P56747 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.89■□□□□ 0.29
CLDN6P56747 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN6P56747 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN6P56747 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.89■□□□□ 0.29
CLDN6P56747 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN6P56747 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN6P56747 AC004877.2-201ENST00000623941 599 ntBASIC16.89■□□□□ 0.29
CLDN6P56747 AC010507.1-201ENST00000633895 436 ntBASIC16.89■□□□□ 0.29
CLDN6P56747 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN6P56747 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN6P56747 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN6P56747 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN6P56747 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN6P56747 BCAR1-209ENST00000546196 1340 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms