Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH11P55287 AP000550.4-202ENST00000639755 178 ntBASIC16.22■□□□□ 0.19
CDH11P55287 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH11P55287 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CDH11P55287 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CDH11P55287 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH11P55287 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CDH11P55287 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH11P55287 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH11P55287 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH11P55287 AL024508.2-201ENST00000607749 1894 ntBASIC16.22■□□□□ 0.19
CDH11P55287 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH11P55287 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CDH11P55287 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH11P55287 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH11P55287 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
CDH11P55287 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH11P55287 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH11P55287 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH11P55287 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH11P55287 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH11P55287 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH11P55287 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH11P55287 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH11P55287 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH11P55287 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH11P55287 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH11P55287 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH11P55287 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH11P55287 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.21■□□□□ 0.19
CDH11P55287 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CDH11P55287 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH11P55287 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CDH11P55287 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH11P55287 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH11P55287 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH11P55287 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH11P55287 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CDH11P55287 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH11P55287 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDH11P55287 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH11P55287 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH11P55287 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH11P55287 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH11P55287 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDH11P55287 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDH11P55287 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDH11P55287 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.21■□□□□ 0.18
CDH11P55287 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.21■□□□□ 0.18
CDH11P55287 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CDH11P55287 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH11P55287 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH11P55287 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CDH11P55287 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CDH11P55287 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDH11P55287 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CDH11P55287 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH11P55287 AC112907.2-201ENST00000448639 330 ntBASIC16.2■□□□□ 0.18
CDH11P55287 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDH11P55287 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDH11P55287 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH11P55287 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH11P55287 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDH11P55287 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
CDH11P55287 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH11P55287 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH11P55287 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH11P55287 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH11P55287 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH11P55287 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CDH11P55287 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDH11P55287 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDH11P55287 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH11P55287 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CDH11P55287 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH11P55287 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH11P55287 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms