Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH8P55286 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.85■□□□□ 0.61
CDH8P55286 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH8P55286 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.85■□□□□ 0.61
CDH8P55286 AC109462.3-201ENST00000573934 613 ntBASIC18.85■□□□□ 0.61
CDH8P55286 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH8P55286 RN7SL510P-201ENST00000581311 263 ntBASIC18.85■□□□□ 0.61
CDH8P55286 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CDH8P55286 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH8P55286 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CDH8P55286 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH8P55286 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CDH8P55286 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH8P55286 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.85■□□□□ 0.61
CDH8P55286 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.85■□□□□ 0.61
CDH8P55286 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.85■□□□□ 0.61
CDH8P55286 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH8P55286 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH8P55286 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.84■□□□□ 0.61
CDH8P55286 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH8P55286 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH8P55286 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.84■□□□□ 0.61
CDH8P55286 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDH8P55286 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
CDH8P55286 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH8P55286 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH8P55286 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CDH8P55286 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH8P55286 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH8P55286 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDH8P55286 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.84■□□□□ 0.61
CDH8P55286 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.84■□□□□ 0.61
CDH8P55286 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.84■□□□□ 0.61
CDH8P55286 AF238378.1-201ENST00000526806 358 ntBASIC18.84■□□□□ 0.61
CDH8P55286 AC111152.3-201ENST00000569699 673 ntBASIC18.84■□□□□ 0.61
CDH8P55286 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDH8P55286 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.84■□□□□ 0.61
CDH8P55286 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.84■□□□□ 0.61
CDH8P55286 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH8P55286 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH8P55286 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.84■□□□□ 0.61
CDH8P55286 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH8P55286 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH8P55286 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDH8P55286 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH8P55286 GNAS-203ENST00000306120 1878 ntBASIC18.84■□□□□ 0.61
CDH8P55286 LINC00304-203ENST00000565008 1864 ntBASIC18.84■□□□□ 0.61
CDH8P55286 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDH8P55286 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDH8P55286 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDH8P55286 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH8P55286 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.83■□□□□ 0.61
CDH8P55286 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDH8P55286 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.83■□□□□ 0.61
CDH8P55286 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH8P55286 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH8P55286 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH8P55286 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH8P55286 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
CDH8P55286 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH8P55286 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH8P55286 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH8P55286 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH8P55286 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH8P55286 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH8P55286 AC103564.2-201ENST00000432853 1299 ntBASIC18.83■□□□□ 0.6
CDH8P55286 ABCD1P5-201ENST00000445663 754 ntBASIC18.83■□□□□ 0.6
CDH8P55286 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH8P55286 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH8P55286 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH8P55286 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH8P55286 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH8P55286 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.83■□□□□ 0.6
CDH8P55286 LINC01711-201ENST00000598340 967 ntBASIC18.83■□□□□ 0.6
CDH8P55286 AL121894.2-201ENST00000602977 491 ntBASIC18.83■□□□□ 0.6
CDH8P55286 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.83■□□□□ 0.6
CDH8P55286 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.83■□□□□ 0.6
CDH8P55286 REXO1L6P-202ENST00000619970 1078 ntBASIC18.83■□□□□ 0.6
CDH8P55286 AL691432.3-201ENST00000621860 400 ntBASIC18.83■□□□□ 0.6
CDH8P55286 AD001527.2-201ENST00000622994 785 ntBASIC18.83■□□□□ 0.6
CDH8P55286 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.83■□□□□ 0.6
CDH8P55286 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH8P55286 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.83■□□□□ 0.6
CDH8P55286 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH8P55286 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH8P55286 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH8P55286 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH8P55286 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH8P55286 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH8P55286 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.82■□□□□ 0.6
CDH8P55286 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.82■□□□□ 0.6
CDH8P55286 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CDH8P55286 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH8P55286 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH8P55286 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH8P55286 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CDH8P55286 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH8P55286 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDH8P55286 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH8P55286 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms