Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
APOC4P55056 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOC4P55056 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
APOC4P55056 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
APOC4P55056 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC12.94□□□□□ -0.34
APOC4P55056 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC4P55056 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOC4P55056 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC4P55056 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC4P55056 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.94□□□□□ -0.34
APOC4P55056 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC4P55056 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
APOC4P55056 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
APOC4P55056 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOC4P55056 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC12.94□□□□□ -0.34
APOC4P55056 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOC4P55056 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC4P55056 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC4P55056 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
APOC4P55056 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.94□□□□□ -0.34
APOC4P55056 AL031284.1-201ENST00000419297 478 ntBASIC12.94□□□□□ -0.34
APOC4P55056 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.94□□□□□ -0.34
APOC4P55056 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.94□□□□□ -0.34
APOC4P55056 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.94□□□□□ -0.34
APOC4P55056 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.94□□□□□ -0.34
APOC4P55056 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.94□□□□□ -0.34
APOC4P55056 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
APOC4P55056 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC12.94□□□□□ -0.34
APOC4P55056 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.94□□□□□ -0.34
APOC4P55056 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOC4P55056 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOC4P55056 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.94□□□□□ -0.34
APOC4P55056 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOC4P55056 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOC4P55056 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
APOC4P55056 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
APOC4P55056 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.94□□□□□ -0.34
APOC4P55056 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.94□□□□□ -0.34
APOC4P55056 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC4P55056 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOC4P55056 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC4P55056 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.94□□□□□ -0.34
APOC4P55056 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOC4P55056 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC12.94□□□□□ -0.34
APOC4P55056 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC12.93□□□□□ -0.34
APOC4P55056 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.93□□□□□ -0.34
APOC4P55056 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC12.93□□□□□ -0.34
APOC4P55056 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
APOC4P55056 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
APOC4P55056 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
APOC4P55056 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC12.93□□□□□ -0.34
APOC4P55056 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC12.93□□□□□ -0.34
APOC4P55056 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
APOC4P55056 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
APOC4P55056 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
APOC4P55056 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 MYCLP1-201ENST00000372451 1075 ntBASIC12.93□□□□□ -0.34
APOC4P55056 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.93□□□□□ -0.34
APOC4P55056 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.93□□□□□ -0.34
APOC4P55056 MRPL3P1-201ENST00000400109 1033 ntBASIC12.93□□□□□ -0.34
APOC4P55056 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
APOC4P55056 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC12.93□□□□□ -0.34
APOC4P55056 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.93□□□□□ -0.34
APOC4P55056 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
APOC4P55056 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.93□□□□□ -0.34
APOC4P55056 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
APOC4P55056 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.93□□□□□ -0.34
APOC4P55056 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.93□□□□□ -0.34
APOC4P55056 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
APOC4P55056 AP000867.4-201ENST00000641616 219 ntBASIC12.93□□□□□ -0.34
APOC4P55056 EFTUD1P1-204ENST00000560401 1798 ntBASIC12.93□□□□□ -0.34
APOC4P55056 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC12.93□□□□□ -0.34
APOC4P55056 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC4P55056 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms