Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.81■□□□□ 0.28
NR1H2P55055 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.81■□□□□ 0.28
NR1H2P55055 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.81■□□□□ 0.28
NR1H2P55055 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.81■□□□□ 0.28
NR1H2P55055 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.81■□□□□ 0.28
NR1H2P55055 AC068587.9-201ENST00000641814 219 ntBASIC16.81■□□□□ 0.28
NR1H2P55055 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.81■□□□□ 0.28
NR1H2P55055 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
NR1H2P55055 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
NR1H2P55055 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NR1H2P55055 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.81■□□□□ 0.28
NR1H2P55055 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
NR1H2P55055 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H2P55055 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.8■□□□□ 0.28
NR1H2P55055 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H2P55055 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H2P55055 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.8■□□□□ 0.28
NR1H2P55055 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H2P55055 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H2P55055 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H2P55055 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.8■□□□□ 0.28
NR1H2P55055 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.8■□□□□ 0.28
NR1H2P55055 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H2P55055 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H2P55055 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NR1H2P55055 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H2P55055 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NR1H2P55055 CCR12P-201ENST00000446203 998 ntBASIC16.8■□□□□ 0.28
NR1H2P55055 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H2P55055 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.8■□□□□ 0.28
NR1H2P55055 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NR1H2P55055 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.8■□□□□ 0.28
NR1H2P55055 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.8■□□□□ 0.28
NR1H2P55055 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NR1H2P55055 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.8■□□□□ 0.28
NR1H2P55055 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H2P55055 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
NR1H2P55055 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H2P55055 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
NR1H2P55055 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.8■□□□□ 0.28
NR1H2P55055 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H2P55055 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.8■□□□□ 0.28
NR1H2P55055 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H2P55055 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NR1H2P55055 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NR1H2P55055 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
NR1H2P55055 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NR1H2P55055 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.8■□□□□ 0.28
NR1H2P55055 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.79■□□□□ 0.28
NR1H2P55055 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
NR1H2P55055 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H2P55055 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H2P55055 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H2P55055 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H2P55055 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
NR1H2P55055 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H2P55055 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NR1H2P55055 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NR1H2P55055 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H2P55055 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H2P55055 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
NR1H2P55055 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.79■□□□□ 0.28
NR1H2P55055 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H2P55055 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
NR1H2P55055 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NR1H2P55055 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H2P55055 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.79■□□□□ 0.28
NR1H2P55055 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.79■□□□□ 0.28
NR1H2P55055 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.79■□□□□ 0.28
NR1H2P55055 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H2P55055 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.79■□□□□ 0.28
NR1H2P55055 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.79■□□□□ 0.28
NR1H2P55055 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
NR1H2P55055 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.79■□□□□ 0.28
NR1H2P55055 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NR1H2P55055 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H2P55055 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NR1H2P55055 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H2P55055 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H2P55055 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H2P55055 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NR1H2P55055 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H2P55055 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H2P55055 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NR1H2P55055 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NR1H2P55055 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms