Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PSMD4P55036 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PSMD4P55036 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.48■□□□□ 0.23
PSMD4P55036 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.48■□□□□ 0.23
PSMD4P55036 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PSMD4P55036 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PSMD4P55036 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PSMD4P55036 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.48■□□□□ 0.23
PSMD4P55036 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PSMD4P55036 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.48■□□□□ 0.23
PSMD4P55036 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PSMD4P55036 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.48■□□□□ 0.23
PSMD4P55036 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.48■□□□□ 0.23
PSMD4P55036 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PSMD4P55036 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PSMD4P55036 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PSMD4P55036 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PSMD4P55036 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PSMD4P55036 AC246785.2-201ENST00000432512 513 ntBASIC16.48■□□□□ 0.23
PSMD4P55036 TSSC2-201ENST00000450217 709 ntBASIC16.48■□□□□ 0.23
PSMD4P55036 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PSMD4P55036 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PSMD4P55036 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PSMD4P55036 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PSMD4P55036 AL358472.4-201ENST00000633140 710 ntBASIC16.48■□□□□ 0.23
PSMD4P55036 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PSMD4P55036 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.48■□□□□ 0.23
PSMD4P55036 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PSMD4P55036 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.48■□□□□ 0.23
PSMD4P55036 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PSMD4P55036 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PSMD4P55036 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PSMD4P55036 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PSMD4P55036 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PSMD4P55036 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PSMD4P55036 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.48■□□□□ 0.23
PSMD4P55036 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.48■□□□□ 0.23
PSMD4P55036 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PSMD4P55036 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.48■□□□□ 0.23
PSMD4P55036 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PSMD4P55036 AC100803.2-201ENST00000562459 1963 ntBASIC16.47■□□□□ 0.23
PSMD4P55036 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PSMD4P55036 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PSMD4P55036 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSMD4P55036 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSMD4P55036 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PSMD4P55036 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSMD4P55036 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSMD4P55036 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.47■□□□□ 0.23
PSMD4P55036 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSMD4P55036 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.47■□□□□ 0.23
PSMD4P55036 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSMD4P55036 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PSMD4P55036 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
PSMD4P55036 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.47■□□□□ 0.23
PSMD4P55036 RN7SL606P-201ENST00000472779 293 ntBASIC16.47■□□□□ 0.23
PSMD4P55036 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.47■□□□□ 0.23
PSMD4P55036 AC069148.1-201ENST00000608741 768 ntBASIC16.47■□□□□ 0.23
PSMD4P55036 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.47■□□□□ 0.23
PSMD4P55036 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PSMD4P55036 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSMD4P55036 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.47■□□□□ 0.23
PSMD4P55036 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PSMD4P55036 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSMD4P55036 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.47■□□□□ 0.23
PSMD4P55036 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSMD4P55036 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PSMD4P55036 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSMD4P55036 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PSMD4P55036 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
PSMD4P55036 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.47■□□□□ 0.23
PSMD4P55036 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.47■□□□□ 0.23
PSMD4P55036 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PSMD4P55036 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PSMD4P55036 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PSMD4P55036 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PSMD4P55036 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PSMD4P55036 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PSMD4P55036 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.46■□□□□ 0.23
PSMD4P55036 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PSMD4P55036 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.46■□□□□ 0.23
PSMD4P55036 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
PSMD4P55036 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PSMD4P55036 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
PSMD4P55036 AC012317.2-201ENST00000623305 2251 ntBASIC16.46■□□□□ 0.23
PSMD4P55036 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
PSMD4P55036 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PSMD4P55036 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PSMD4P55036 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.46■□□□□ 0.23
PSMD4P55036 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PSMD4P55036 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PSMD4P55036 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
PSMD4P55036 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.46■□□□□ 0.23
PSMD4P55036 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.46■□□□□ 0.23
PSMD4P55036 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.46■□□□□ 0.23
PSMD4P55036 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PSMD4P55036 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.46■□□□□ 0.23
PSMD4P55036 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PSMD4P55036 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PSMD4P55036 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms