Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CACNA2D1P54289 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CACNA2D1P54289 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
CACNA2D1P54289 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CACNA2D1P54289 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CACNA2D1P54289 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CACNA2D1P54289 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CACNA2D1P54289 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CACNA2D1P54289 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CACNA2D1P54289 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CACNA2D1P54289 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CACNA2D1P54289 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CACNA2D1P54289 FAM220CP-201ENST00000395253 831 ntBASIC18.73■□□□□ 0.59
CACNA2D1P54289 MRPL3P1-201ENST00000400109 1033 ntBASIC18.73■□□□□ 0.59
CACNA2D1P54289 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.73■□□□□ 0.59
CACNA2D1P54289 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CACNA2D1P54289 AL160237.2-201ENST00000556165 472 ntBASIC18.73■□□□□ 0.59
CACNA2D1P54289 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.73■□□□□ 0.59
CACNA2D1P54289 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CACNA2D1P54289 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.73■□□□□ 0.59
CACNA2D1P54289 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CACNA2D1P54289 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CACNA2D1P54289 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CACNA2D1P54289 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CACNA2D1P54289 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.73■□□□□ 0.59
CACNA2D1P54289 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.73■□□□□ 0.59
CACNA2D1P54289 KRT8P10-201ENST00000450021 1447 ntBASIC18.73■□□□□ 0.59
CACNA2D1P54289 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CACNA2D1P54289 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CACNA2D1P54289 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CACNA2D1P54289 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CACNA2D1P54289 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CACNA2D1P54289 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CACNA2D1P54289 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.73■□□□□ 0.59
CACNA2D1P54289 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CACNA2D1P54289 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CACNA2D1P54289 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CACNA2D1P54289 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CACNA2D1P54289 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CACNA2D1P54289 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 AC106795.1-205ENST00000512851 1056 ntBASIC18.72■□□□□ 0.59
CACNA2D1P54289 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 AC008608.2-201ENST00000606089 416 ntBASIC18.72■□□□□ 0.59
CACNA2D1P54289 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CACNA2D1P54289 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 KRT18P55-202ENST00000578578 1546 ntBASIC18.72■□□□□ 0.59
CACNA2D1P54289 SIRPAP1-201ENST00000448467 1770 ntBASIC18.72■□□□□ 0.59
CACNA2D1P54289 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CACNA2D1P54289 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CACNA2D1P54289 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.72■□□□□ 0.59
CACNA2D1P54289 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CACNA2D1P54289 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CACNA2D1P54289 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CACNA2D1P54289 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CACNA2D1P54289 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CACNA2D1P54289 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CACNA2D1P54289 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CACNA2D1P54289 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CACNA2D1P54289 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CACNA2D1P54289 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CACNA2D1P54289 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CACNA2D1P54289 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CACNA2D1P54289 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CACNA2D1P54289 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CACNA2D1P54289 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
CACNA2D1P54289 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.71■□□□□ 0.59
CACNA2D1P54289 ABCD1P5-201ENST00000445663 754 ntBASIC18.71■□□□□ 0.59
CACNA2D1P54289 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.71■□□□□ 0.59
CACNA2D1P54289 FGFR3P6-201ENST00000457012 610 ntBASIC18.71■□□□□ 0.59
CACNA2D1P54289 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.71■□□□□ 0.59
CACNA2D1P54289 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.71■□□□□ 0.59
CACNA2D1P54289 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.71■□□□□ 0.59
CACNA2D1P54289 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.71■□□□□ 0.59
CACNA2D1P54289 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CACNA2D1P54289 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.71■□□□□ 0.59
CACNA2D1P54289 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.71■□□□□ 0.59
CACNA2D1P54289 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CACNA2D1P54289 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CACNA2D1P54289 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CACNA2D1P54289 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms