Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.34■□□□□ 0.05
HCFC1P51610 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HCFC1P51610 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.33■□□□□ 0.05
HCFC1P51610 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.33■□□□□ 0.05
HCFC1P51610 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HCFC1P51610 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
HCFC1P51610 AC090164.3-201ENST00000610780 2143 ntBASIC15.33■□□□□ 0.05
HCFC1P51610 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HCFC1P51610 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.33■□□□□ 0.05
HCFC1P51610 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.33■□□□□ 0.05
HCFC1P51610 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HCFC1P51610 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HCFC1P51610 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
HCFC1P51610 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HCFC1P51610 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1P51610 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.33■□□□□ 0.04
HCFC1P51610 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.33■□□□□ 0.04
HCFC1P51610 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
HCFC1P51610 PDPK2P-202ENST00000562415 1191 ntBASIC15.33■□□□□ 0.04
HCFC1P51610 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.33■□□□□ 0.04
HCFC1P51610 AC109462.3-201ENST00000573934 613 ntBASIC15.33■□□□□ 0.04
HCFC1P51610 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.33■□□□□ 0.04
HCFC1P51610 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.33■□□□□ 0.04
HCFC1P51610 AC004706.3-202ENST00000621574 984 ntBASIC15.33■□□□□ 0.04
HCFC1P51610 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.33■□□□□ 0.04
HCFC1P51610 AL133373.2-201ENST00000623187 2828 ntBASIC15.33■□□□□ 0.04
HCFC1P51610 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1P51610 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1P51610 AC132938.5-201ENST00000624980 1813 ntBASIC15.33■□□□□ 0.04
HCFC1P51610 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1P51610 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1P51610 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1P51610 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
HCFC1P51610 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1P51610 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
HCFC1P51610 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
HCFC1P51610 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HCFC1P51610 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.33■□□□□ 0.04
HCFC1P51610 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.33■□□□□ 0.04
HCFC1P51610 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1P51610 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1P51610 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.33■□□□□ 0.04
HCFC1P51610 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1P51610 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.33■□□□□ 0.04
HCFC1P51610 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HCFC1P51610 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.33■□□□□ 0.04
HCFC1P51610 AC010507.1-201ENST00000633895 436 ntBASIC15.33■□□□□ 0.04
HCFC1P51610 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HCFC1P51610 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.32■□□□□ 0.04
HCFC1P51610 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.32■□□□□ 0.04
HCFC1P51610 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.32■□□□□ 0.04
HCFC1P51610 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
HCFC1P51610 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.32■□□□□ 0.04
HCFC1P51610 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.32■□□□□ 0.04
HCFC1P51610 MIR4469-201ENST00000583919 79 ntBASIC15.32■□□□□ 0.04
HCFC1P51610 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HCFC1P51610 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HCFC1P51610 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.32■□□□□ 0.04
HCFC1P51610 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.32■□□□□ 0.04
HCFC1P51610 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.32■□□□□ 0.04
HCFC1P51610 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
HCFC1P51610 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.32■□□□□ 0.04
HCFC1P51610 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HCFC1P51610 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HCFC1P51610 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1P51610 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC15.31■□□□□ 0.04
HCFC1P51610 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.31■□□□□ 0.04
HCFC1P51610 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.31■□□□□ 0.04
HCFC1P51610 AC005332.8-201ENST00000622750 2735 ntBASIC15.31■□□□□ 0.04
HCFC1P51610 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1P51610 ACTG1P4-201ENST00000425123 1122 ntBASIC15.31■□□□□ 0.04
HCFC1P51610 RHOQP3-201ENST00000437982 621 ntBASIC15.31■□□□□ 0.04
HCFC1P51610 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HCFC1P51610 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.31■□□□□ 0.04
HCFC1P51610 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.31■□□□□ 0.04
HCFC1P51610 KRT19P2-202ENST00000557173 1012 ntBASIC15.31■□□□□ 0.04
HCFC1P51610 AC011467.4-201ENST00000594891 528 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms