Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.11■□□□□ 0.65
PDE6CP51160 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.11■□□□□ 0.65
PDE6CP51160 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.11■□□□□ 0.65
PDE6CP51160 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PDE6CP51160 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6CP51160 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.11■□□□□ 0.65
PDE6CP51160 TPSP2-201ENST00000561760 610 ntBASIC19.11■□□□□ 0.65
PDE6CP51160 AC012615.1-201ENST00000565797 1299 ntBASIC19.11■□□□□ 0.65
PDE6CP51160 AC111152.3-201ENST00000569699 673 ntBASIC19.11■□□□□ 0.65
PDE6CP51160 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.11■□□□□ 0.65
PDE6CP51160 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PDE6CP51160 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.11■□□□□ 0.65
PDE6CP51160 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.11■□□□□ 0.65
PDE6CP51160 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6CP51160 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PDE6CP51160 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6CP51160 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6CP51160 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6CP51160 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PDE6CP51160 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6CP51160 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6CP51160 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE6CP51160 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PDE6CP51160 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6CP51160 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6CP51160 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6CP51160 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.1■□□□□ 0.65
PDE6CP51160 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
PDE6CP51160 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.1■□□□□ 0.65
PDE6CP51160 KRT8P47-201ENST00000604727 1398 ntBASIC19.1■□□□□ 0.65
PDE6CP51160 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
PDE6CP51160 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6CP51160 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6CP51160 AC009949.1-201ENST00000623048 1830 ntBASIC19.1■□□□□ 0.65
PDE6CP51160 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6CP51160 LINC00265-3P-201ENST00000447588 903 ntBASIC19.1■□□□□ 0.65
PDE6CP51160 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.1■□□□□ 0.65
PDE6CP51160 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.1■□□□□ 0.65
PDE6CP51160 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6CP51160 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6CP51160 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6CP51160 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6CP51160 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6CP51160 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PDE6CP51160 AL355312.1-201ENST00000407115 2176 ntBASIC19.1■□□□□ 0.65
PDE6CP51160 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6CP51160 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6CP51160 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6CP51160 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.1■□□□□ 0.65
PDE6CP51160 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6CP51160 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PDE6CP51160 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
PDE6CP51160 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6CP51160 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6CP51160 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
PDE6CP51160 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6CP51160 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6CP51160 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6CP51160 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.09■□□□□ 0.65
PDE6CP51160 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PDE6CP51160 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6CP51160 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6CP51160 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6CP51160 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6CP51160 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6CP51160 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6CP51160 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6CP51160 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.09■□□□□ 0.65
PDE6CP51160 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6CP51160 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6CP51160 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.09■□□□□ 0.65
PDE6CP51160 Z69720.1-201ENST00000601483 472 ntBASIC19.09■□□□□ 0.65
PDE6CP51160 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.09■□□□□ 0.65
PDE6CP51160 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.09■□□□□ 0.65
PDE6CP51160 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.09■□□□□ 0.65
PDE6CP51160 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6CP51160 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6CP51160 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
PDE6CP51160 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6CP51160 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6CP51160 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PDE6CP51160 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6CP51160 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.09■□□□□ 0.65
PDE6CP51160 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDE6CP51160 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.08■□□□□ 0.65
PDE6CP51160 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
PDE6CP51160 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDE6CP51160 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.08■□□□□ 0.65
PDE6CP51160 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
PDE6CP51160 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDE6CP51160 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.08■□□□□ 0.65
PDE6CP51160 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDE6CP51160 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.08■□□□□ 0.65
PDE6CP51160 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDE6CP51160 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDE6CP51160 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.08■□□□□ 0.65
PDE6CP51160 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.08■□□□□ 0.64
PDE6CP51160 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.08■□□□□ 0.64
PDE6CP51160 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.08■□□□□ 0.64
PDE6CP51160 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms