Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPT1AP50416 ELL2P1-201ENST00000413990 1906 ntBASIC19.49■□□□□ 0.71
CPT1AP50416 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPT1AP50416 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CPT1AP50416 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPT1AP50416 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CPT1AP50416 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CPT1AP50416 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPT1AP50416 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPT1AP50416 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPT1AP50416 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPT1AP50416 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.48■□□□□ 0.71
CPT1AP50416 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPT1AP50416 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPT1AP50416 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPT1AP50416 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.48■□□□□ 0.71
CPT1AP50416 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CPT1AP50416 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.48■□□□□ 0.71
CPT1AP50416 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.48■□□□□ 0.71
CPT1AP50416 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CPT1AP50416 AC004877.2-201ENST00000623941 599 ntBASIC19.48■□□□□ 0.71
CPT1AP50416 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPT1AP50416 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.48■□□□□ 0.71
CPT1AP50416 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPT1AP50416 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPT1AP50416 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CPT1AP50416 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPT1AP50416 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CPT1AP50416 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPT1AP50416 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CPT1AP50416 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPT1AP50416 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CPT1AP50416 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.47■□□□□ 0.71
CPT1AP50416 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPT1AP50416 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPT1AP50416 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CPT1AP50416 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPT1AP50416 AP000974.1-201ENST00000623909 2387 ntBASIC19.47■□□□□ 0.71
CPT1AP50416 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CPT1AP50416 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPT1AP50416 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPT1AP50416 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPT1AP50416 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPT1AP50416 CNN2P11-201ENST00000429351 262 ntBASIC19.47■□□□□ 0.71
CPT1AP50416 CEND1P1-201ENST00000451006 455 ntBASIC19.47■□□□□ 0.71
CPT1AP50416 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.47■□□□□ 0.71
CPT1AP50416 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CPT1AP50416 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CPT1AP50416 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.47■□□□□ 0.71
CPT1AP50416 REXO1L9P-201ENST00000604264 2108 ntBASIC19.47■□□□□ 0.71
CPT1AP50416 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.47■□□□□ 0.71
CPT1AP50416 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPT1AP50416 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.47■□□□□ 0.71
CPT1AP50416 BCAR1-209ENST00000546196 1340 ntBASIC19.47■□□□□ 0.71
CPT1AP50416 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPT1AP50416 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CPT1AP50416 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPT1AP50416 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPT1AP50416 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.47■□□□□ 0.71
CPT1AP50416 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CPT1AP50416 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CPT1AP50416 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CPT1AP50416 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CPT1AP50416 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CPT1AP50416 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPT1AP50416 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPT1AP50416 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPT1AP50416 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPT1AP50416 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.46■□□□□ 0.71
CPT1AP50416 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CPT1AP50416 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CPT1AP50416 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CPT1AP50416 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPT1AP50416 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPT1AP50416 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CPT1AP50416 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.46■□□□□ 0.71
CPT1AP50416 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPT1AP50416 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.46■□□□□ 0.71
CPT1AP50416 KRT19P2-202ENST00000557173 1012 ntBASIC19.46■□□□□ 0.71
CPT1AP50416 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.46■□□□□ 0.71
CPT1AP50416 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.46■□□□□ 0.71
CPT1AP50416 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CPT1AP50416 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CPT1AP50416 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.46■□□□□ 0.71
CPT1AP50416 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CPT1AP50416 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CPT1AP50416 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPT1AP50416 AL020996.1-203ENST00000536896 2307 ntBASIC19.46■□□□□ 0.71
CPT1AP50416 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.46■□□□□ 0.71
CPT1AP50416 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.46■□□□□ 0.71
CPT1AP50416 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPT1AP50416 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.45■□□□□ 0.7
CPT1AP50416 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
CPT1AP50416 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CPT1AP50416 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPT1AP50416 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CPT1AP50416 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.45■□□□□ 0.7
CPT1AP50416 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CPT1AP50416 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPT1AP50416 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms