Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CASP4P49662 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.67
CASP4P49662 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CASP4P49662 AL138688.1-201ENST00000624851 1594 ntBASIC19.27■□□□□ 0.67
CASP4P49662 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CASP4P49662 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASP4P49662 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CASP4P49662 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CASP4P49662 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASP4P49662 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASP4P49662 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASP4P49662 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.26■□□□□ 0.67
CASP4P49662 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CASP4P49662 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CASP4P49662 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.26■□□□□ 0.67
CASP4P49662 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASP4P49662 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASP4P49662 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASP4P49662 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASP4P49662 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASP4P49662 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASP4P49662 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.26■□□□□ 0.67
CASP4P49662 KRT17P6-201ENST00000453795 1220 ntBASIC19.26■□□□□ 0.67
CASP4P49662 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CASP4P49662 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.26■□□□□ 0.67
CASP4P49662 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CASP4P49662 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.26■□□□□ 0.67
CASP4P49662 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.26■□□□□ 0.67
CASP4P49662 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.26■□□□□ 0.67
CASP4P49662 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.26■□□□□ 0.67
CASP4P49662 AC019129.2-201ENST00000609837 1235 ntBASIC19.26■□□□□ 0.67
CASP4P49662 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CASP4P49662 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASP4P49662 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.26■□□□□ 0.67
CASP4P49662 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CASP4P49662 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.26■□□□□ 0.67
CASP4P49662 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASP4P49662 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CASP4P49662 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.25■□□□□ 0.67
CASP4P49662 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP4P49662 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP4P49662 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP4P49662 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP4P49662 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.25■□□□□ 0.67
CASP4P49662 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP4P49662 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP4P49662 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CASP4P49662 AC012313.1-201ENST00000593393 3059 ntBASIC19.25■□□□□ 0.67
CASP4P49662 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP4P49662 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CASP4P49662 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP4P49662 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.25■□□□□ 0.67
CASP4P49662 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.25■□□□□ 0.67
CASP4P49662 IGHV3-47-201ENST00000425060 335 ntBASIC19.25■□□□□ 0.67
CASP4P49662 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP4P49662 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.25■□□□□ 0.67
CASP4P49662 AC074051.2-201ENST00000565115 352 ntBASIC19.25■□□□□ 0.67
CASP4P49662 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CASP4P49662 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.25■□□□□ 0.67
CASP4P49662 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
CASP4P49662 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP4P49662 LYSMD4-203ENST00000378904 2122 ntBASIC19.25■□□□□ 0.67
CASP4P49662 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CASP4P49662 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CASP4P49662 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CASP4P49662 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.25■□□□□ 0.67
CASP4P49662 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.25■□□□□ 0.67
CASP4P49662 NSUN5P1-202ENST00000421140 1535 ntBASIC19.25■□□□□ 0.67
CASP4P49662 NSUN5P2-203ENST00000457352 1529 ntBASIC19.25■□□□□ 0.67
CASP4P49662 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.25■□□□□ 0.67
CASP4P49662 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP4P49662 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP4P49662 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CASP4P49662 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CASP4P49662 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CASP4P49662 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CASP4P49662 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASP4P49662 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.24■□□□□ 0.67
CASP4P49662 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.24■□□□□ 0.67
CASP4P49662 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CASP4P49662 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.24■□□□□ 0.67
CASP4P49662 VENTXP7-201ENST00000475503 772 ntBASIC19.24■□□□□ 0.67
CASP4P49662 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.24■□□□□ 0.67
CASP4P49662 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.24■□□□□ 0.67
CASP4P49662 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.24■□□□□ 0.67
CASP4P49662 BNIP3P18-201ENST00000593976 575 ntBASIC19.24■□□□□ 0.67
CASP4P49662 Z69720.1-201ENST00000601483 472 ntBASIC19.24■□□□□ 0.67
CASP4P49662 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.24■□□□□ 0.67
CASP4P49662 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASP4P49662 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASP4P49662 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CASP4P49662 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CASP4P49662 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CASP4P49662 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CASP4P49662 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASP4P49662 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASP4P49662 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CASP4P49662 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.24■□□□□ 0.67
CASP4P49662 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CASP4P49662 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms