Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CX3CR1P49238 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
CX3CR1P49238 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.56■□□□□ 0.08
CX3CR1P49238 AC211429.1-201ENST00000415277 523 ntBASIC15.56■□□□□ 0.08
CX3CR1P49238 AK4P3-201ENST00000418260 669 ntBASIC15.56■□□□□ 0.08
CX3CR1P49238 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.56■□□□□ 0.08
CX3CR1P49238 DDX43P3-201ENST00000441064 443 ntBASIC15.56■□□□□ 0.08
CX3CR1P49238 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.56■□□□□ 0.08
CX3CR1P49238 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.56■□□□□ 0.08
CX3CR1P49238 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.56■□□□□ 0.08
CX3CR1P49238 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
CX3CR1P49238 LINC01023-201ENST00000606054 436 ntBASIC15.56■□□□□ 0.08
CX3CR1P49238 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.56■□□□□ 0.08
CX3CR1P49238 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CX3CR1P49238 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.56■□□□□ 0.08
CX3CR1P49238 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 AC124067.4-201ENST00000519691 2379 ntBASIC15.56■□□□□ 0.08
CX3CR1P49238 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.56■□□□□ 0.08
CX3CR1P49238 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.56■□□□□ 0.08
CX3CR1P49238 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CX3CR1P49238 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.56■□□□□ 0.08
CX3CR1P49238 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CX3CR1P49238 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CX3CR1P49238 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CX3CR1P49238 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CX3CR1P49238 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CX3CR1P49238 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CX3CR1P49238 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CX3CR1P49238 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CX3CR1P49238 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CX3CR1P49238 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CX3CR1P49238 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
CX3CR1P49238 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.55■□□□□ 0.08
CX3CR1P49238 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CX3CR1P49238 HLA-J-201ENST00000462773 1622 ntBASIC15.55■□□□□ 0.08
CX3CR1P49238 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CX3CR1P49238 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CX3CR1P49238 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.55■□□□□ 0.08
CX3CR1P49238 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CX3CR1P49238 IGHGP-201ENST00000390555 1178 ntBASIC15.55■□□□□ 0.08
CX3CR1P49238 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.55■□□□□ 0.08
CX3CR1P49238 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CX3CR1P49238 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.55■□□□□ 0.08
CX3CR1P49238 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CX3CR1P49238 AC112907.2-201ENST00000448639 330 ntBASIC15.55■□□□□ 0.08
CX3CR1P49238 KRT18P38-201ENST00000449496 1282 ntBASIC15.55■□□□□ 0.08
CX3CR1P49238 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.55■□□□□ 0.08
CX3CR1P49238 AC092647.4-201ENST00000457211 535 ntBASIC15.55■□□□□ 0.08
CX3CR1P49238 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.55■□□□□ 0.08
CX3CR1P49238 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CX3CR1P49238 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.55■□□□□ 0.08
CX3CR1P49238 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.55■□□□□ 0.08
CX3CR1P49238 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.55■□□□□ 0.08
CX3CR1P49238 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.55■□□□□ 0.08
CX3CR1P49238 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
CX3CR1P49238 AC006011.2-201ENST00000621313 1158 ntBASIC15.55■□□□□ 0.08
CX3CR1P49238 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.55■□□□□ 0.08
CX3CR1P49238 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.55■□□□□ 0.08
CX3CR1P49238 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CX3CR1P49238 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CX3CR1P49238 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CX3CR1P49238 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CX3CR1P49238 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CX3CR1P49238 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CX3CR1P49238 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.55■□□□□ 0.08
CX3CR1P49238 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CX3CR1P49238 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CX3CR1P49238 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CX3CR1P49238 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CX3CR1P49238 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CX3CR1P49238 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CX3CR1P49238 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CX3CR1P49238 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CX3CR1P49238 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CX3CR1P49238 AL023806.1-201ENST00000603994 1649 ntBASIC15.54■□□□□ 0.08
CX3CR1P49238 AL138688.1-201ENST00000624851 1594 ntBASIC15.54■□□□□ 0.08
CX3CR1P49238 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.54■□□□□ 0.08
CX3CR1P49238 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CX3CR1P49238 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CX3CR1P49238 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.54■□□□□ 0.08
CX3CR1P49238 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CX3CR1P49238 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CX3CR1P49238 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CX3CR1P49238 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms