Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1DP48730 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.69■□□□□ 0.42
CSNK1DP48730 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1DP48730 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.69■□□□□ 0.42
CSNK1DP48730 SIGLEC30P-201ENST00000455569 941 ntBASIC17.69■□□□□ 0.42
CSNK1DP48730 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.69■□□□□ 0.42
CSNK1DP48730 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1DP48730 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1DP48730 SART3-203ENST00000546611 1184 ntBASIC17.69■□□□□ 0.42
CSNK1DP48730 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1DP48730 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CSNK1DP48730 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1DP48730 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CSNK1DP48730 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.69■□□□□ 0.42
CSNK1DP48730 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.69■□□□□ 0.42
CSNK1DP48730 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1DP48730 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.69■□□□□ 0.42
CSNK1DP48730 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CSNK1DP48730 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1DP48730 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CSNK1DP48730 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1DP48730 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.69■□□□□ 0.42
CSNK1DP48730 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CSNK1DP48730 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CSNK1DP48730 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1DP48730 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1DP48730 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CSNK1DP48730 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CSNK1DP48730 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1DP48730 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CSNK1DP48730 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CSNK1DP48730 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1DP48730 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1DP48730 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1DP48730 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CSNK1DP48730 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.68■□□□□ 0.42
CSNK1DP48730 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1DP48730 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CSNK1DP48730 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CSNK1DP48730 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1DP48730 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1DP48730 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1DP48730 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.68■□□□□ 0.42
CSNK1DP48730 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1DP48730 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CSNK1DP48730 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.68■□□□□ 0.42
CSNK1DP48730 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.68■□□□□ 0.42
CSNK1DP48730 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.68■□□□□ 0.42
CSNK1DP48730 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.68■□□□□ 0.42
CSNK1DP48730 AP002469.2-201ENST00000531724 424 ntBASIC17.68■□□□□ 0.42
CSNK1DP48730 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.68■□□□□ 0.42
CSNK1DP48730 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.68■□□□□ 0.42
CSNK1DP48730 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CSNK1DP48730 AL121894.2-201ENST00000602977 491 ntBASIC17.68■□□□□ 0.42
CSNK1DP48730 AC064862.7-201ENST00000604520 867 ntBASIC17.68■□□□□ 0.42
CSNK1DP48730 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1DP48730 TP73-AS1-207ENST00000624167 988 ntBASIC17.68■□□□□ 0.42
CSNK1DP48730 AL022326.1-202ENST00000641533 845 ntBASIC17.68■□□□□ 0.42
CSNK1DP48730 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1DP48730 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CSNK1DP48730 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
CSNK1DP48730 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSNK1DP48730 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.68■□□□□ 0.42
CSNK1DP48730 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
CSNK1DP48730 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1DP48730 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1DP48730 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1DP48730 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.67■□□□□ 0.42
CSNK1DP48730 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1DP48730 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1DP48730 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1DP48730 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.67■□□□□ 0.42
CSNK1DP48730 AC068880.1-201ENST00000507289 2297 ntBASIC17.67■□□□□ 0.42
CSNK1DP48730 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1DP48730 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CSNK1DP48730 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.67■□□□□ 0.42
CSNK1DP48730 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.67■□□□□ 0.42
CSNK1DP48730 FAM197Y8-203ENST00000450145 560 ntBASIC17.67■□□□□ 0.42
CSNK1DP48730 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CSNK1DP48730 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.67■□□□□ 0.42
CSNK1DP48730 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.67■□□□□ 0.42
CSNK1DP48730 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.67■□□□□ 0.42
CSNK1DP48730 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CSNK1DP48730 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1DP48730 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1DP48730 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1DP48730 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSNK1DP48730 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.67■□□□□ 0.42
CSNK1DP48730 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.67■□□□□ 0.42
CSNK1DP48730 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
CSNK1DP48730 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1DP48730 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.66■□□□□ 0.42
CSNK1DP48730 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1DP48730 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1DP48730 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1DP48730 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1DP48730 KRT18P67-201ENST00000432816 1264 ntBASIC17.66■□□□□ 0.42
CSNK1DP48730 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.66■□□□□ 0.42
CSNK1DP48730 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.66■□□□□ 0.42
CSNK1DP48730 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms