Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.43■□□□□ 0.06
GDNFP39905 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GDNFP39905 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GDNFP39905 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GDNFP39905 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
GDNFP39905 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
GDNFP39905 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
GDNFP39905 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.43■□□□□ 0.06
GDNFP39905 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
GDNFP39905 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.43■□□□□ 0.06
GDNFP39905 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
GDNFP39905 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.43■□□□□ 0.06
GDNFP39905 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.43■□□□□ 0.06
GDNFP39905 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.43■□□□□ 0.06
GDNFP39905 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
GDNFP39905 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
GDNFP39905 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.42■□□□□ 0.06
GDNFP39905 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.42■□□□□ 0.06
GDNFP39905 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
GDNFP39905 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.42■□□□□ 0.06
GDNFP39905 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.42■□□□□ 0.06
GDNFP39905 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 CYP2D8P-201ENST00000433633 1490 ntBASIC15.42■□□□□ 0.06
GDNFP39905 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.42■□□□□ 0.06
GDNFP39905 MIR564-202ENST00000385049 94 ntBASIC15.42■□□□□ 0.06
GDNFP39905 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.42■□□□□ 0.06
GDNFP39905 AL023284.2-201ENST00000405850 579 ntBASIC15.42■□□□□ 0.06
GDNFP39905 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
GDNFP39905 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.42■□□□□ 0.06
GDNFP39905 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.42■□□□□ 0.06
GDNFP39905 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.42■□□□□ 0.06
GDNFP39905 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.42■□□□□ 0.06
GDNFP39905 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.42■□□□□ 0.06
GDNFP39905 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
GDNFP39905 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GDNFP39905 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDNFP39905 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
GDNFP39905 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GDNFP39905 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.41■□□□□ 0.06
GDNFP39905 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDNFP39905 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.41■□□□□ 0.06
GDNFP39905 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDNFP39905 FLJ38576-201ENST00000623820 2459 ntBASIC15.41■□□□□ 0.06
GDNFP39905 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.41■□□□□ 0.06
GDNFP39905 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
GDNFP39905 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.41■□□□□ 0.06
GDNFP39905 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDNFP39905 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
GDNFP39905 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
GDNFP39905 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDNFP39905 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
GDNFP39905 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
GDNFP39905 INGX-201ENST00000359239 846 ntBASIC15.41■□□□□ 0.06
GDNFP39905 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GDNFP39905 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.41■□□□□ 0.06
GDNFP39905 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.41■□□□□ 0.06
GDNFP39905 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.41■□□□□ 0.06
GDNFP39905 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDNFP39905 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDNFP39905 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
GDNFP39905 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDNFP39905 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.41■□□□□ 0.06
GDNFP39905 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDNFP39905 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.41■□□□□ 0.06
GDNFP39905 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDNFP39905 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDNFP39905 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.41■□□□□ 0.06
GDNFP39905 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.41■□□□□ 0.06
GDNFP39905 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GDNFP39905 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.41■□□□□ 0.06
GDNFP39905 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDNFP39905 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
GDNFP39905 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.4■□□□□ 0.06
GDNFP39905 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 AC009102.3-201ENST00000623118 1491 ntBASIC15.4■□□□□ 0.06
GDNFP39905 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GDNFP39905 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms