Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC1P35251 BX276092.5-203ENST00000456199 560 ntBASIC18.64■□□□□ 0.57
RFC1P35251 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.64■□□□□ 0.57
RFC1P35251 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.64■□□□□ 0.57
RFC1P35251 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RFC1P35251 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
RFC1P35251 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.64■□□□□ 0.57
RFC1P35251 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.64■□□□□ 0.57
RFC1P35251 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RFC1P35251 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC1P35251 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RFC1P35251 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC1P35251 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC1P35251 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFC1P35251 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC1P35251 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
RFC1P35251 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.63■□□□□ 0.57
RFC1P35251 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RFC1P35251 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.63■□□□□ 0.57
RFC1P35251 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.63■□□□□ 0.57
RFC1P35251 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 AC096633.1-201ENST00000422446 749 ntBASIC18.63■□□□□ 0.57
RFC1P35251 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.63■□□□□ 0.57
RFC1P35251 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.63■□□□□ 0.57
RFC1P35251 AL445228.2-201ENST00000605589 952 ntBASIC18.63■□□□□ 0.57
RFC1P35251 AL121672.3-201ENST00000608644 468 ntBASIC18.63■□□□□ 0.57
RFC1P35251 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.63■□□□□ 0.57
RFC1P35251 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.63■□□□□ 0.57
RFC1P35251 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC1P35251 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFC1P35251 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC1P35251 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC1P35251 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC1P35251 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC1P35251 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.62■□□□□ 0.57
RFC1P35251 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC1P35251 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC1P35251 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC1P35251 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC1P35251 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFC1P35251 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC1P35251 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.62■□□□□ 0.57
RFC1P35251 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC1P35251 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.62■□□□□ 0.57
RFC1P35251 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.62■□□□□ 0.57
RFC1P35251 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFC1P35251 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC1P35251 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC1P35251 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFC1P35251 AC010331.1-201ENST00000611423 582 ntBASIC18.62■□□□□ 0.57
RFC1P35251 AC097374.2-201ENST00000618617 1306 ntBASIC18.62■□□□□ 0.57
RFC1P35251 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.62■□□□□ 0.57
RFC1P35251 IER3-202ENST00000376377 1350 ntBASIC18.62■□□□□ 0.57
RFC1P35251 AC010460.3-201ENST00000511359 1579 ntBASIC18.62■□□□□ 0.57
RFC1P35251 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.62■□□□□ 0.57
RFC1P35251 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC1P35251 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC1P35251 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC1P35251 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
RFC1P35251 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC1P35251 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RFC1P35251 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RFC1P35251 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RFC1P35251 AC139713.2-201ENST00000641328 2723 ntBASIC18.61■□□□□ 0.57
RFC1P35251 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFC1P35251 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFC1P35251 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.61■□□□□ 0.57
RFC1P35251 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.61■□□□□ 0.57
RFC1P35251 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFC1P35251 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.61■□□□□ 0.57
RFC1P35251 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFC1P35251 HLA-J-201ENST00000462773 1622 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms