Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.27■□□□□ 0.52
PTPN7P35236 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.27■□□□□ 0.52
PTPN7P35236 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.27■□□□□ 0.52
PTPN7P35236 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.27■□□□□ 0.52
PTPN7P35236 AL353801.3-201ENST00000609898 542 ntBASIC18.27■□□□□ 0.52
PTPN7P35236 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.27■□□□□ 0.52
PTPN7P35236 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.27■□□□□ 0.52
PTPN7P35236 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN7P35236 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTPN7P35236 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.27■□□□□ 0.51
PTPN7P35236 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.27■□□□□ 0.51
PTPN7P35236 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.27■□□□□ 0.51
PTPN7P35236 OR6D1P-202ENST00000641007 5290 ntBASIC18.27■□□□□ 0.51
PTPN7P35236 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTPN7P35236 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTPN7P35236 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN7P35236 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.26■□□□□ 0.51
PTPN7P35236 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
PTPN7P35236 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN7P35236 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.26■□□□□ 0.51
PTPN7P35236 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN7P35236 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN7P35236 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN7P35236 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN7P35236 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN7P35236 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN7P35236 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.26■□□□□ 0.51
PTPN7P35236 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN7P35236 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN7P35236 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.26■□□□□ 0.51
PTPN7P35236 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.26■□□□□ 0.51
PTPN7P35236 AC211429.1-201ENST00000415277 523 ntBASIC18.26■□□□□ 0.51
PTPN7P35236 AC092647.4-201ENST00000457211 535 ntBASIC18.26■□□□□ 0.51
PTPN7P35236 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.26■□□□□ 0.51
PTPN7P35236 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.26■□□□□ 0.51
PTPN7P35236 LINC01023-201ENST00000606054 436 ntBASIC18.26■□□□□ 0.51
PTPN7P35236 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.26■□□□□ 0.51
PTPN7P35236 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PTPN7P35236 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN7P35236 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN7P35236 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN7P35236 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN7P35236 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PTPN7P35236 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.26■□□□□ 0.51
PTPN7P35236 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PTPN7P35236 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.26■□□□□ 0.51
PTPN7P35236 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.26■□□□□ 0.51
PTPN7P35236 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PTPN7P35236 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTPN7P35236 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.26■□□□□ 0.51
PTPN7P35236 PCDHA12-202ENST00000613593 2588 ntBASIC18.26■□□□□ 0.51
PTPN7P35236 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PTPN7P35236 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN7P35236 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN7P35236 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN7P35236 AC022211.2-201ENST00000585075 2527 ntBASIC18.25■□□□□ 0.51
PTPN7P35236 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PTPN7P35236 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPN7P35236 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN7P35236 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN7P35236 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPN7P35236 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN7P35236 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN7P35236 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPN7P35236 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPN7P35236 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN7P35236 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PTPN7P35236 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PTPN7P35236 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
PTPN7P35236 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.25■□□□□ 0.51
PTPN7P35236 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.25■□□□□ 0.51
PTPN7P35236 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
PTPN7P35236 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTPN7P35236 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPN7P35236 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN7P35236 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPN7P35236 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PTPN7P35236 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN7P35236 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN7P35236 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPN7P35236 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.24■□□□□ 0.51
PTPN7P35236 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN7P35236 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN7P35236 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN7P35236 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN7P35236 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PTPN7P35236 AC104076.2-201ENST00000448912 469 ntBASIC18.24■□□□□ 0.51
PTPN7P35236 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.24■□□□□ 0.51
PTPN7P35236 RN7SL606P-201ENST00000472779 293 ntBASIC18.24■□□□□ 0.51
PTPN7P35236 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PTPN7P35236 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.24■□□□□ 0.51
PTPN7P35236 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.24■□□□□ 0.51
PTPN7P35236 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.24■□□□□ 0.51
PTPN7P35236 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN7P35236 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN7P35236 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PTPN7P35236 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PTPN7P35236 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTPN7P35236 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PTPN7P35236 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms