Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC23.67■■□□□ 1.38
USP6P35125 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC23.67■■□□□ 1.38
USP6P35125 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP6P35125 ORC5-208ENST00000626700 344 ntTSL 3 BASIC23.67■■□□□ 1.38
USP6P35125 AC007064.4-201ENST00000637740 555 ntBASIC23.67■■□□□ 1.38
USP6P35125 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC23.67■■□□□ 1.38
USP6P35125 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
USP6P35125 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
USP6P35125 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP6P35125 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
USP6P35125 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP6P35125 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC23.67■■□□□ 1.38
USP6P35125 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC23.67■■□□□ 1.38
USP6P35125 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP6P35125 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
USP6P35125 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
USP6P35125 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
USP6P35125 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
USP6P35125 AC046185.3-201ENST00000623228 1824 ntBASIC23.67■■□□□ 1.38
USP6P35125 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
USP6P35125 PNMT-202ENST00000394246 821 ntTSL 2 BASIC23.67■■□□□ 1.38
USP6P35125 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC23.67■■□□□ 1.38
USP6P35125 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
USP6P35125 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC23.67■■□□□ 1.38
USP6P35125 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC23.67■■□□□ 1.38
USP6P35125 METTL23-205ENST00000588302 925 ntTSL 5 BASIC23.67■■□□□ 1.38
USP6P35125 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC23.67■■□□□ 1.38
USP6P35125 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
USP6P35125 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP6P35125 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC23.66■■□□□ 1.38
USP6P35125 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC23.66■■□□□ 1.38
USP6P35125 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC23.66■■□□□ 1.38
USP6P35125 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP6P35125 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC23.66■■□□□ 1.38
USP6P35125 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC23.66■■□□□ 1.38
USP6P35125 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
USP6P35125 AC092919.2-201ENST00000623631 1645 ntBASIC23.66■■□□□ 1.38
USP6P35125 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP6P35125 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP6P35125 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP6P35125 AL139400.1-201ENST00000366220 510 ntBASIC23.66■■□□□ 1.38
USP6P35125 TSEN15P1-201ENST00000423257 515 ntBASIC23.66■■□□□ 1.38
USP6P35125 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC23.66■■□□□ 1.38
USP6P35125 MED16-214ENST00000617672 554 ntTSL 5 BASIC23.66■■□□□ 1.38
USP6P35125 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
USP6P35125 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC23.66■■□□□ 1.38
USP6P35125 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC23.65■■□□□ 1.38
USP6P35125 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
USP6P35125 HLA-DQB1-201ENST00000374943 1656 ntBASIC23.65■■□□□ 1.38
USP6P35125 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC23.65■■□□□ 1.38
USP6P35125 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP6P35125 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
USP6P35125 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP6P35125 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP6P35125 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP6P35125 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP6P35125 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
USP6P35125 CYP51A1P2-201ENST00000419457 1499 ntBASIC23.65■■□□□ 1.38
USP6P35125 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
USP6P35125 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
USP6P35125 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC23.65■■□□□ 1.38
USP6P35125 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
USP6P35125 AL645939.2-201ENST00000427340 991 ntBASIC23.65■■□□□ 1.38
USP6P35125 AC087163.2-201ENST00000457299 853 ntBASIC23.65■■□□□ 1.38
USP6P35125 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC23.65■■□□□ 1.38
USP6P35125 SLC25A6P2-201ENST00000497974 877 ntBASIC23.65■■□□□ 1.38
USP6P35125 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
USP6P35125 RNF34-208ENST00000555076 593 ntTSL 3 BASIC23.65■■□□□ 1.38
USP6P35125 RPL28-205ENST00000558131 444 ntTSL 5 BASIC23.65■■□□□ 1.38
USP6P35125 MNT-208ENST00000575394 606 ntTSL 4 BASIC23.65■■□□□ 1.38
USP6P35125 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
USP6P35125 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC23.65■■□□□ 1.38
USP6P35125 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP6P35125 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
USP6P35125 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
USP6P35125 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC23.64■■□□□ 1.38
USP6P35125 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
USP6P35125 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
USP6P35125 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
USP6P35125 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
USP6P35125 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
USP6P35125 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC23.64■■□□□ 1.37
USP6P35125 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC23.64■■□□□ 1.37
USP6P35125 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC23.64■■□□□ 1.37
USP6P35125 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC23.64■■□□□ 1.37
USP6P35125 AC093028.1-201ENST00000622998 982 ntBASIC23.64■■□□□ 1.37
USP6P35125 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
USP6P35125 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
USP6P35125 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
USP6P35125 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
USP6P35125 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
USP6P35125 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
USP6P35125 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
USP6P35125 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
USP6P35125 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC23.63■■□□□ 1.37
USP6P35125 DDT-204ENST00000404092 805 ntTSL 3 BASIC23.63■■□□□ 1.37
USP6P35125 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC23.63■■□□□ 1.37
USP6P35125 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC23.63■■□□□ 1.37
USP6P35125 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
USP6P35125 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms