Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 AL355306.1-201ENST00000415580 579 ntBASIC17.32■□□□□ 0.36
HOXA6P31267 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.32■□□□□ 0.36
HOXA6P31267 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXA6P31267 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.32■□□□□ 0.36
HOXA6P31267 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.32■□□□□ 0.36
HOXA6P31267 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXA6P31267 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.32■□□□□ 0.36
HOXA6P31267 AC051619.7-201ENST00000568314 623 ntBASIC17.32■□□□□ 0.36
HOXA6P31267 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
HOXA6P31267 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HOXA6P31267 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXA6P31267 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HOXA6P31267 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXA6P31267 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXA6P31267 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXA6P31267 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HOXA6P31267 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXA6P31267 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HOXA6P31267 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXA6P31267 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXA6P31267 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.31■□□□□ 0.36
HOXA6P31267 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HOXA6P31267 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.31■□□□□ 0.36
HOXA6P31267 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXA6P31267 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXA6P31267 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXA6P31267 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXA6P31267 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HOXA6P31267 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXA6P31267 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.31■□□□□ 0.36
HOXA6P31267 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HOXA6P31267 AL671277.1-201ENST00000429656 993 ntBASIC17.31■□□□□ 0.36
HOXA6P31267 AC055876.3-201ENST00000431496 288 ntBASIC17.31■□□□□ 0.36
HOXA6P31267 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.31■□□□□ 0.36
HOXA6P31267 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.31■□□□□ 0.36
HOXA6P31267 INGX-202ENST00000489074 768 ntBASIC17.31■□□□□ 0.36
HOXA6P31267 AC069335.1-201ENST00000489972 472 ntBASIC17.31■□□□□ 0.36
HOXA6P31267 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.31■□□□□ 0.36
HOXA6P31267 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HOXA6P31267 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.31■□□□□ 0.36
HOXA6P31267 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.31■□□□□ 0.36
HOXA6P31267 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.31■□□□□ 0.36
HOXA6P31267 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.31■□□□□ 0.36
HOXA6P31267 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.31■□□□□ 0.36
HOXA6P31267 AC138649.4-201ENST00000612222 287 ntBASIC17.31■□□□□ 0.36
HOXA6P31267 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HOXA6P31267 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXA6P31267 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.31■□□□□ 0.36
HOXA6P31267 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.31■□□□□ 0.36
HOXA6P31267 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXA6P31267 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA6P31267 AC126763.1-201ENST00000552015 2118 ntBASIC17.3■□□□□ 0.36
HOXA6P31267 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXA6P31267 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA6P31267 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.3■□□□□ 0.36
HOXA6P31267 AC015922.1-201ENST00000421102 1152 ntBASIC17.3■□□□□ 0.36
HOXA6P31267 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXA6P31267 AC140658.5-201ENST00000438532 169 ntBASIC17.3■□□□□ 0.36
HOXA6P31267 TIMM8BP1-201ENST00000452384 211 ntBASIC17.3■□□□□ 0.36
HOXA6P31267 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA6P31267 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA6P31267 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HOXA6P31267 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXA6P31267 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.3■□□□□ 0.36
HOXA6P31267 DUX4L27-201ENST00000554796 1261 ntBASIC17.3■□□□□ 0.36
HOXA6P31267 AC087641.1-201ENST00000557561 1021 ntBASIC17.3■□□□□ 0.36
HOXA6P31267 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA6P31267 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA6P31267 AL645728.2-201ENST00000641974 660 ntBASIC17.3■□□□□ 0.36
HOXA6P31267 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
HOXA6P31267 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA6P31267 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA6P31267 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA6P31267 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HOXA6P31267 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA6P31267 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA6P31267 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.3■□□□□ 0.36
HOXA6P31267 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
HOXA6P31267 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXA6P31267 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA6P31267 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA6P31267 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA6P31267 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA6P31267 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA6P31267 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA6P31267 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.29■□□□□ 0.36
HOXA6P31267 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXA6P31267 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HOXA6P31267 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA6P31267 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXA6P31267 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA6P31267 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXA6P31267 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA6P31267 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXA6P31267 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXA6P31267 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXA6P31267 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXA6P31267 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXA6P31267 BASP1P1-201ENST00000430708 665 ntBASIC17.29■□□□□ 0.36
HOXA6P31267 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms