Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
MMP11P24347 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP11P24347 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.79■□□□□ 0.28
MMP11P24347 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
MMP11P24347 AC112698.1-201ENST00000510299 916 ntBASIC16.79■□□□□ 0.28
MMP11P24347 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.79■□□□□ 0.28
MMP11P24347 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.79■□□□□ 0.28
MMP11P24347 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP11P24347 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.79■□□□□ 0.28
MMP11P24347 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP11P24347 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP11P24347 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP11P24347 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP11P24347 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP11P24347 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP11P24347 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP11P24347 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP11P24347 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP11P24347 PHGDH-209ENST00000641074 1780 ntBASIC16.79■□□□□ 0.28
MMP11P24347 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP11P24347 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP11P24347 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP11P24347 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
MMP11P24347 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
MMP11P24347 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
MMP11P24347 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
MMP11P24347 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP11P24347 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
MMP11P24347 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.78■□□□□ 0.28
MMP11P24347 MRPL3P1-201ENST00000400109 1033 ntBASIC16.78■□□□□ 0.28
MMP11P24347 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.78■□□□□ 0.28
MMP11P24347 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.78■□□□□ 0.28
MMP11P24347 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MMP11P24347 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.78■□□□□ 0.28
MMP11P24347 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
MMP11P24347 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.78■□□□□ 0.28
MMP11P24347 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
MMP11P24347 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.78■□□□□ 0.28
MMP11P24347 AC011467.2-201ENST00000598425 242 ntBASIC16.78■□□□□ 0.28
MMP11P24347 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.78■□□□□ 0.28
MMP11P24347 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
MMP11P24347 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP11P24347 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP11P24347 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP11P24347 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.78■□□□□ 0.28
MMP11P24347 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP11P24347 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.78■□□□□ 0.28
MMP11P24347 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MMP11P24347 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP11P24347 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP11P24347 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MMP11P24347 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.78■□□□□ 0.28
MMP11P24347 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP11P24347 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP11P24347 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.77■□□□□ 0.28
MMP11P24347 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP11P24347 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MMP11P24347 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.77■□□□□ 0.28
MMP11P24347 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP11P24347 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP11P24347 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP11P24347 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP11P24347 INTS4P1-201ENST00000438455 1935 ntBASIC16.77■□□□□ 0.28
MMP11P24347 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MMP11P24347 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP11P24347 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.77■□□□□ 0.28
MMP11P24347 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MMP11P24347 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.77■□□□□ 0.28
MMP11P24347 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.77■□□□□ 0.28
MMP11P24347 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP11P24347 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MMP11P24347 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP11P24347 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
MMP11P24347 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MMP11P24347 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.77■□□□□ 0.27
MMP11P24347 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MMP11P24347 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MMP11P24347 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.77■□□□□ 0.27
MMP11P24347 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
MMP11P24347 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MMP11P24347 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
MMP11P24347 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MMP11P24347 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP11P24347 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP11P24347 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.76■□□□□ 0.27
MMP11P24347 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.76■□□□□ 0.27
MMP11P24347 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP11P24347 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP11P24347 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP11P24347 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP11P24347 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
MMP11P24347 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
MMP11P24347 HTR7P1-202ENST00000624664 4411 ntBASIC16.76■□□□□ 0.27
MMP11P24347 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.76■□□□□ 0.27
MMP11P24347 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP11P24347 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP11P24347 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.76■□□□□ 0.27
MMP11P24347 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MMP11P24347 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.76■□□□□ 0.27
MMP11P24347 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms