Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NR4A1P22736 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NR4A1P22736 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR4A1P22736 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR4A1P22736 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR4A1P22736 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.48■□□□□ 0.23
NR4A1P22736 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NR4A1P22736 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR4A1P22736 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NR4A1P22736 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR4A1P22736 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NR4A1P22736 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR4A1P22736 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NR4A1P22736 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR4A1P22736 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR4A1P22736 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR4A1P22736 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR4A1P22736 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NR4A1P22736 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NR4A1P22736 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR4A1P22736 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR4A1P22736 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR4A1P22736 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NR4A1P22736 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NR4A1P22736 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.47■□□□□ 0.23
NR4A1P22736 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.47■□□□□ 0.23
NR4A1P22736 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.47■□□□□ 0.23
NR4A1P22736 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.47■□□□□ 0.23
NR4A1P22736 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
NR4A1P22736 AC145285.6-201ENST00000604632 637 ntBASIC16.47■□□□□ 0.23
NR4A1P22736 AC012306.2-201ENST00000609350 630 ntBASIC16.47■□□□□ 0.23
NR4A1P22736 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.47■□□□□ 0.23
NR4A1P22736 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR4A1P22736 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NR4A1P22736 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR4A1P22736 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.47■□□□□ 0.23
NR4A1P22736 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NR4A1P22736 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR4A1P22736 AC092850.2-201ENST00000623821 2697 ntBASIC16.47■□□□□ 0.23
NR4A1P22736 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NR4A1P22736 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NR4A1P22736 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
NR4A1P22736 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.46■□□□□ 0.23
NR4A1P22736 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.46■□□□□ 0.23
NR4A1P22736 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.46■□□□□ 0.23
NR4A1P22736 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.46■□□□□ 0.23
NR4A1P22736 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
NR4A1P22736 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NR4A1P22736 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
NR4A1P22736 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.46■□□□□ 0.23
NR4A1P22736 PCDHA1-201ENST00000378133 2726 ntBASIC16.46■□□□□ 0.23
NR4A1P22736 TSPY14P-201ENST00000303979 915 ntBASIC16.46■□□□□ 0.23
NR4A1P22736 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.46■□□□□ 0.23
NR4A1P22736 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.46■□□□□ 0.23
NR4A1P22736 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.46■□□□□ 0.23
NR4A1P22736 EGLN1P1-201ENST00000531623 762 ntBASIC16.46■□□□□ 0.23
NR4A1P22736 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NR4A1P22736 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.46■□□□□ 0.23
NR4A1P22736 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.46■□□□□ 0.23
NR4A1P22736 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.46■□□□□ 0.23
NR4A1P22736 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.46■□□□□ 0.23
NR4A1P22736 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.46■□□□□ 0.23
NR4A1P22736 LINC01568-207ENST00000641790 1380 ntBASIC16.46■□□□□ 0.23
NR4A1P22736 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
NR4A1P22736 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.46■□□□□ 0.23
NR4A1P22736 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.46■□□□□ 0.23
NR4A1P22736 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.46■□□□□ 0.23
NR4A1P22736 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR4A1P22736 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.46■□□□□ 0.22
NR4A1P22736 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
NR4A1P22736 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NR4A1P22736 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
NR4A1P22736 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NR4A1P22736 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NR4A1P22736 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms