Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ERCC3P19447 AC010460.3-201ENST00000511359 1579 ntBASIC20.43■□□□□ 0.86
ERCC3P19447 AL133373.2-201ENST00000623187 2828 ntBASIC20.43■□□□□ 0.86
ERCC3P19447 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC3P19447 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.43■□□□□ 0.86
ERCC3P19447 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC3P19447 AC079776.2-201ENST00000641154 1609 ntBASIC20.43■□□□□ 0.86
ERCC3P19447 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC3P19447 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC3P19447 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC3P19447 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC3P19447 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC3P19447 LAGE3P1-201ENST00000425356 484 ntBASIC20.43■□□□□ 0.86
ERCC3P19447 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC3P19447 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.43■□□□□ 0.86
ERCC3P19447 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC3P19447 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
ERCC3P19447 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC3P19447 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC3P19447 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.43■□□□□ 0.86
ERCC3P19447 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.43■□□□□ 0.86
ERCC3P19447 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC3P19447 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC3P19447 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC3P19447 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ERCC3P19447 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.43■□□□□ 0.86
ERCC3P19447 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.42■□□□□ 0.86
ERCC3P19447 PMPCAP1-201ENST00000508114 1576 ntBASIC20.42■□□□□ 0.86
ERCC3P19447 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ERCC3P19447 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 AC005332.8-201ENST00000622750 2735 ntBASIC20.42■□□□□ 0.86
ERCC3P19447 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ERCC3P19447 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
ERCC3P19447 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.42■□□□□ 0.86
ERCC3P19447 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 AC096633.1-201ENST00000422446 749 ntBASIC20.42■□□□□ 0.86
ERCC3P19447 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.42■□□□□ 0.86
ERCC3P19447 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.42■□□□□ 0.86
ERCC3P19447 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.42■□□□□ 0.86
ERCC3P19447 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.42■□□□□ 0.86
ERCC3P19447 AC055717.3-201ENST00000622967 595 ntBASIC20.42■□□□□ 0.86
ERCC3P19447 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ERCC3P19447 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ERCC3P19447 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ERCC3P19447 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ERCC3P19447 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ERCC3P19447 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ERCC3P19447 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC3P19447 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ERCC3P19447 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC3P19447 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC3P19447 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC3P19447 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
ERCC3P19447 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC3P19447 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC3P19447 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC3P19447 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.41■□□□□ 0.86
ERCC3P19447 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.41■□□□□ 0.86
ERCC3P19447 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC3P19447 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.41■□□□□ 0.86
ERCC3P19447 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.41■□□□□ 0.86
ERCC3P19447 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.41■□□□□ 0.86
ERCC3P19447 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC3P19447 AL022326.1-202ENST00000641533 845 ntBASIC20.41■□□□□ 0.86
ERCC3P19447 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC3P19447 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
ERCC3P19447 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC3P19447 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC3P19447 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC3P19447 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.41■□□□□ 0.86
ERCC3P19447 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC3P19447 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
ERCC3P19447 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC3P19447 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.41■□□□□ 0.86
ERCC3P19447 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.41■□□□□ 0.86
ERCC3P19447 AC004817.3-201ENST00000602957 2129 ntBASIC20.41■□□□□ 0.86
ERCC3P19447 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ERCC3P19447 AC135050.7-201ENST00000624508 2218 ntBASIC20.41■□□□□ 0.86
ERCC3P19447 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERCC3P19447 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms