Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SMPD1P17405 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMPD1P17405 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
SMPD1P17405 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMPD1P17405 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.55■□□□□ 0.72
SMPD1P17405 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.55■□□□□ 0.72
SMPD1P17405 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.55■□□□□ 0.72
SMPD1P17405 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMPD1P17405 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMPD1P17405 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMPD1P17405 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMPD1P17405 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.55■□□□□ 0.72
SMPD1P17405 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SMPD1P17405 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.55■□□□□ 0.72
SMPD1P17405 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.55■□□□□ 0.72
SMPD1P17405 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.55■□□□□ 0.72
SMPD1P17405 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.55■□□□□ 0.72
SMPD1P17405 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMPD1P17405 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMPD1P17405 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SMPD1P17405 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.55■□□□□ 0.72
SMPD1P17405 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMPD1P17405 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMPD1P17405 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMPD1P17405 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMPD1P17405 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SMPD1P17405 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMPD1P17405 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.54■□□□□ 0.72
SMPD1P17405 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMPD1P17405 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SMPD1P17405 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMPD1P17405 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMPD1P17405 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.54■□□□□ 0.72
SMPD1P17405 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMPD1P17405 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.54■□□□□ 0.72
SMPD1P17405 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMPD1P17405 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMPD1P17405 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.54■□□□□ 0.72
SMPD1P17405 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.54■□□□□ 0.72
SMPD1P17405 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMPD1P17405 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMPD1P17405 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMPD1P17405 MYCLP1-201ENST00000372451 1075 ntBASIC19.54■□□□□ 0.72
SMPD1P17405 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.54■□□□□ 0.72
SMPD1P17405 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.54■□□□□ 0.72
SMPD1P17405 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SMPD1P17405 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SMPD1P17405 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
SMPD1P17405 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.54■□□□□ 0.72
SMPD1P17405 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.54■□□□□ 0.72
SMPD1P17405 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMPD1P17405 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.54■□□□□ 0.72
SMPD1P17405 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMPD1P17405 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SMPD1P17405 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMPD1P17405 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SMPD1P17405 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.53■□□□□ 0.72
SMPD1P17405 AC025580.3-201ENST00000617932 1424 ntBASIC19.53■□□□□ 0.72
SMPD1P17405 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SMPD1P17405 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMPD1P17405 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SMPD1P17405 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMPD1P17405 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SMPD1P17405 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.53■□□□□ 0.72
SMPD1P17405 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.53■□□□□ 0.72
SMPD1P17405 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.53■□□□□ 0.72
SMPD1P17405 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMPD1P17405 LINC02084-201ENST00000606069 1096 ntBASIC19.53■□□□□ 0.72
SMPD1P17405 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.53■□□□□ 0.72
SMPD1P17405 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.53■□□□□ 0.72
SMPD1P17405 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SMPD1P17405 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMPD1P17405 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMPD1P17405 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMPD1P17405 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.53■□□□□ 0.72
SMPD1P17405 PI4KAP1-204ENST00000612579 1703 ntBASIC19.53■□□□□ 0.72
SMPD1P17405 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
SMPD1P17405 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.52■□□□□ 0.72
SMPD1P17405 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMPD1P17405 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMPD1P17405 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SMPD1P17405 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMPD1P17405 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SMPD1P17405 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMPD1P17405 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMPD1P17405 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.52■□□□□ 0.72
SMPD1P17405 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMPD1P17405 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMPD1P17405 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMPD1P17405 RFPL4AP1-201ENST00000530883 850 ntBASIC19.52■□□□□ 0.72
SMPD1P17405 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.52■□□□□ 0.72
SMPD1P17405 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.52■□□□□ 0.72
SMPD1P17405 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.52■□□□□ 0.72
SMPD1P17405 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.52■□□□□ 0.72
SMPD1P17405 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMPD1P17405 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMPD1P17405 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMPD1P17405 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
SMPD1P17405 AL590787.1-201ENST00000568856 1315 ntBASIC19.51■□□□□ 0.71
SMPD1P17405 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms