Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
DEFA4P12838 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.42□□□□□ -0.1
DEFA4P12838 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
DEFA4P12838 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DEFA4P12838 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
DEFA4P12838 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.42□□□□□ -0.1
DEFA4P12838 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
DEFA4P12838 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
DEFA4P12838 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
DEFA4P12838 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
DEFA4P12838 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
DEFA4P12838 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 INGX-201ENST00000359239 846 ntBASIC14.41□□□□□ -0.1
DEFA4P12838 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.41□□□□□ -0.1
DEFA4P12838 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.41□□□□□ -0.1
DEFA4P12838 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.41□□□□□ -0.1
DEFA4P12838 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.41□□□□□ -0.1
DEFA4P12838 AC010240.3-201ENST00000607688 395 ntBASIC14.41□□□□□ -0.1
DEFA4P12838 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.41□□□□□ -0.1
DEFA4P12838 AC066615.1-201ENST00000640911 628 ntBASIC14.41□□□□□ -0.1
DEFA4P12838 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.41□□□□□ -0.1
DEFA4P12838 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.41□□□□□ -0.1
DEFA4P12838 PHGDH-209ENST00000641074 1780 ntBASIC14.41□□□□□ -0.1
DEFA4P12838 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.41□□□□□ -0.1
DEFA4P12838 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.41□□□□□ -0.1
DEFA4P12838 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
DEFA4P12838 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.41□□□□□ -0.1
DEFA4P12838 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.41□□□□□ -0.1
DEFA4P12838 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DEFA4P12838 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.4□□□□□ -0.1
DEFA4P12838 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.4□□□□□ -0.1
DEFA4P12838 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DEFA4P12838 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DEFA4P12838 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
DEFA4P12838 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
DEFA4P12838 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.4□□□□□ -0.1
DEFA4P12838 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DEFA4P12838 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
DEFA4P12838 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
DEFA4P12838 LIN28AP1-201ENST00000429574 405 ntBASIC14.4□□□□□ -0.1
DEFA4P12838 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.4□□□□□ -0.1
DEFA4P12838 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.4□□□□□ -0.1
DEFA4P12838 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.4□□□□□ -0.1
DEFA4P12838 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.4□□□□□ -0.1
DEFA4P12838 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DEFA4P12838 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
DEFA4P12838 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DEFA4P12838 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
DEFA4P12838 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DEFA4P12838 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DEFA4P12838 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
DEFA4P12838 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
DEFA4P12838 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DEFA4P12838 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DEFA4P12838 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.4□□□□□ -0.1
DEFA4P12838 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.4□□□□□ -0.1
DEFA4P12838 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
DEFA4P12838 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
DEFA4P12838 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
DEFA4P12838 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DEFA4P12838 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
DEFA4P12838 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DEFA4P12838 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.4□□□□□ -0.1
DEFA4P12838 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA4P12838 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA4P12838 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA4P12838 AC018695.7-201ENST00000624587 2492 ntBASIC14.39□□□□□ -0.11
DEFA4P12838 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.39□□□□□ -0.11
DEFA4P12838 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA4P12838 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.39□□□□□ -0.11
DEFA4P12838 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA4P12838 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA4P12838 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA4P12838 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA4P12838 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DEFA4P12838 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.39□□□□□ -0.11
DEFA4P12838 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms