Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRFP11831 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFP11831 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.75■□□□□ 0.43
SRFP11831 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.75■□□□□ 0.43
SRFP11831 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SRFP11831 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFP11831 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRFP11831 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFP11831 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SRFP11831 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.75■□□□□ 0.43
SRFP11831 AL355306.1-201ENST00000415580 579 ntBASIC17.75■□□□□ 0.43
SRFP11831 AC015922.1-201ENST00000421102 1152 ntBASIC17.75■□□□□ 0.43
SRFP11831 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SRFP11831 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.75■□□□□ 0.43
SRFP11831 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.75■□□□□ 0.43
SRFP11831 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.75■□□□□ 0.43
SRFP11831 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFP11831 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFP11831 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRFP11831 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRFP11831 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.75■□□□□ 0.43
SRFP11831 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
SRFP11831 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SRFP11831 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFP11831 AC100803.2-201ENST00000562459 1963 ntBASIC17.75■□□□□ 0.43
SRFP11831 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFP11831 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFP11831 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SRFP11831 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRFP11831 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRFP11831 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.74■□□□□ 0.43
SRFP11831 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRFP11831 AL031598.1-201ENST00000561511 1773 ntBASIC17.74■□□□□ 0.43
SRFP11831 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SRFP11831 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SRFP11831 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRFP11831 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRFP11831 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRFP11831 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SRFP11831 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRFP11831 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.74■□□□□ 0.43
SRFP11831 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SRFP11831 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRFP11831 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SRFP11831 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRFP11831 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRFP11831 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.74■□□□□ 0.43
SRFP11831 BASP1P1-201ENST00000430708 665 ntBASIC17.74■□□□□ 0.43
SRFP11831 AC005237.2-201ENST00000434368 219 ntBASIC17.74■□□□□ 0.43
SRFP11831 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.74■□□□□ 0.43
SRFP11831 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.74■□□□□ 0.43
SRFP11831 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.74■□□□□ 0.43
SRFP11831 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.74■□□□□ 0.43
SRFP11831 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.74■□□□□ 0.43
SRFP11831 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SRFP11831 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRFP11831 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRFP11831 AC009949.1-201ENST00000623048 1830 ntBASIC17.74■□□□□ 0.43
SRFP11831 AC073592.3-201ENST00000625118 1834 ntBASIC17.74■□□□□ 0.43
SRFP11831 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRFP11831 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRFP11831 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.74■□□□□ 0.43
SRFP11831 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SRFP11831 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRFP11831 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SRFP11831 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRFP11831 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.73■□□□□ 0.43
SRFP11831 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRFP11831 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRFP11831 AC116562.4-201ENST00000641316 2276 ntBASIC17.73■□□□□ 0.43
SRFP11831 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SRFP11831 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.73■□□□□ 0.43
SRFP11831 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRFP11831 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.73■□□□□ 0.43
SRFP11831 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRFP11831 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.73■□□□□ 0.43
SRFP11831 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.73■□□□□ 0.43
SRFP11831 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SRFP11831 AL671277.1-201ENST00000429656 993 ntBASIC17.73■□□□□ 0.43
SRFP11831 SPDYE11-202ENST00000450699 704 ntBASIC17.73■□□□□ 0.43
SRFP11831 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SRFP11831 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.73■□□□□ 0.43
SRFP11831 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SRFP11831 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.73■□□□□ 0.43
SRFP11831 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.73■□□□□ 0.43
SRFP11831 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.73■□□□□ 0.43
SRFP11831 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.73■□□□□ 0.43
SRFP11831 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SRFP11831 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.73■□□□□ 0.43
SRFP11831 AC087641.1-201ENST00000557561 1021 ntBASIC17.73■□□□□ 0.43
SRFP11831 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.73■□□□□ 0.43
SRFP11831 SPDYE9P-201ENST00000570642 692 ntBASIC17.73■□□□□ 0.43
SRFP11831 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.73■□□□□ 0.43
SRFP11831 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.73■□□□□ 0.43
SRFP11831 SPDYE10P-202ENST00000612005 668 ntBASIC17.73■□□□□ 0.43
SRFP11831 SPDYE8P-202ENST00000612377 668 ntBASIC17.73■□□□□ 0.43
SRFP11831 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.73■□□□□ 0.43
SRFP11831 AL096828.2-201ENST00000567259 1965 ntBASIC17.73■□□□□ 0.43
SRFP11831 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRFP11831 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms