Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.03□□□□□ -0.16
PF4V1P10720 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.03□□□□□ -0.16
PF4V1P10720 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.03□□□□□ -0.16
PF4V1P10720 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PF4V1P10720 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PF4V1P10720 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PF4V1P10720 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PF4V1P10720 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
PF4V1P10720 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PF4V1P10720 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PF4V1P10720 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.02□□□□□ -0.16
PF4V1P10720 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.02□□□□□ -0.16
PF4V1P10720 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.02□□□□□ -0.16
PF4V1P10720 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PF4V1P10720 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.02□□□□□ -0.16
PF4V1P10720 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.02□□□□□ -0.16
PF4V1P10720 BICD1-207ENST00000551848 1962 ntBASIC14.02□□□□□ -0.16
PF4V1P10720 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PF4V1P10720 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PF4V1P10720 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PF4V1P10720 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PF4V1P10720 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
PF4V1P10720 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
PF4V1P10720 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PF4V1P10720 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PF4V1P10720 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PF4V1P10720 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.02□□□□□ -0.17
PF4V1P10720 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.02□□□□□ -0.17
PF4V1P10720 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
PF4V1P10720 POM121L3P-201ENST00000419331 1163 ntBASIC14.02□□□□□ -0.17
PF4V1P10720 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.02□□□□□ -0.17
PF4V1P10720 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.02□□□□□ -0.17
PF4V1P10720 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PF4V1P10720 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.02□□□□□ -0.17
PF4V1P10720 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.02□□□□□ -0.17
PF4V1P10720 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PF4V1P10720 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.02□□□□□ -0.17
PF4V1P10720 AC112698.1-201ENST00000510299 916 ntBASIC14.02□□□□□ -0.17
PF4V1P10720 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PF4V1P10720 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.02□□□□□ -0.17
PF4V1P10720 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.02□□□□□ -0.17
PF4V1P10720 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.02□□□□□ -0.17
PF4V1P10720 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
PF4V1P10720 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.02□□□□□ -0.17
PF4V1P10720 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PF4V1P10720 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.02□□□□□ -0.17
PF4V1P10720 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
PF4V1P10720 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PF4V1P10720 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PF4V1P10720 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
PF4V1P10720 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PF4V1P10720 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PF4V1P10720 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PF4V1P10720 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
PF4V1P10720 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.01□□□□□ -0.17
PF4V1P10720 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.01□□□□□ -0.17
PF4V1P10720 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PF4V1P10720 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.01□□□□□ -0.17
PF4V1P10720 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.01□□□□□ -0.17
PF4V1P10720 NEFHP1-201ENST00000412845 2629 ntBASIC14.01□□□□□ -0.17
PF4V1P10720 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.01□□□□□ -0.17
PF4V1P10720 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.01□□□□□ -0.17
PF4V1P10720 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PF4V1P10720 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PF4V1P10720 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PF4V1P10720 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PF4V1P10720 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PF4V1P10720 AC135050.7-201ENST00000624508 2218 ntBASIC14.01□□□□□ -0.17
PF4V1P10720 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PF4V1P10720 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PF4V1P10720 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PF4V1P10720 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.01□□□□□ -0.17
PF4V1P10720 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.01□□□□□ -0.17
PF4V1P10720 AP002469.2-201ENST00000531724 424 ntBASIC14.01□□□□□ -0.17
PF4V1P10720 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.01□□□□□ -0.17
PF4V1P10720 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.01□□□□□ -0.17
PF4V1P10720 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.01□□□□□ -0.17
PF4V1P10720 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.01□□□□□ -0.17
PF4V1P10720 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
PF4V1P10720 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.01□□□□□ -0.17
PF4V1P10720 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PF4V1P10720 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PF4V1P10720 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PF4V1P10720 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PF4V1P10720 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.01□□□□□ -0.17
PF4V1P10720 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PF4V1P10720 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PF4V1P10720 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
PF4V1P10720 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PF4V1P10720 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PF4V1P10720 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
PF4V1P10720 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PF4V1P10720 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PF4V1P10720 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PF4V1P10720 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.01□□□□□ -0.17
PF4V1P10720 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms