Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RARAP10276 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RARAP10276 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RARAP10276 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RARAP10276 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.56■□□□□ 0.56
RARAP10276 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RARAP10276 AL645929.1-201ENST00000420084 975 ntBASIC18.56■□□□□ 0.56
RARAP10276 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.56■□□□□ 0.56
RARAP10276 MTCL1P1-201ENST00000446207 792 ntBASIC18.56■□□□□ 0.56
RARAP10276 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RARAP10276 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.56■□□□□ 0.56
RARAP10276 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.56■□□□□ 0.56
RARAP10276 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
RARAP10276 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.56■□□□□ 0.56
RARAP10276 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.56■□□□□ 0.56
RARAP10276 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.56■□□□□ 0.56
RARAP10276 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
RARAP10276 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RARAP10276 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.56■□□□□ 0.56
RARAP10276 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.56■□□□□ 0.56
RARAP10276 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RARAP10276 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.56■□□□□ 0.56
RARAP10276 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RARAP10276 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RARAP10276 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RARAP10276 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.56■□□□□ 0.56
RARAP10276 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.56■□□□□ 0.56
RARAP10276 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.56■□□□□ 0.56
RARAP10276 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RARAP10276 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RARAP10276 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
RARAP10276 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RARAP10276 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.55■□□□□ 0.56
RARAP10276 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.55■□□□□ 0.56
RARAP10276 AL139384.1-201ENST00000612143 3047 ntBASIC18.55■□□□□ 0.56
RARAP10276 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
RARAP10276 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RARAP10276 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RARAP10276 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RARAP10276 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RARAP10276 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.55■□□□□ 0.56
RARAP10276 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.55■□□□□ 0.56
RARAP10276 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.55■□□□□ 0.56
RARAP10276 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RARAP10276 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.55■□□□□ 0.56
RARAP10276 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RARAP10276 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
RARAP10276 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.55■□□□□ 0.56
RARAP10276 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.55■□□□□ 0.56
RARAP10276 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RARAP10276 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RARAP10276 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RARAP10276 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RARAP10276 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
RARAP10276 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.55■□□□□ 0.56
RARAP10276 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RARAP10276 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RARAP10276 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RARAP10276 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RARAP10276 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RARAP10276 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RARAP10276 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RARAP10276 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RARAP10276 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RARAP10276 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RARAP10276 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RARAP10276 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.54■□□□□ 0.56
RARAP10276 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RARAP10276 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RARAP10276 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RARAP10276 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RARAP10276 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RARAP10276 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.54■□□□□ 0.56
RARAP10276 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RARAP10276 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RARAP10276 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.54■□□□□ 0.56
RARAP10276 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.54■□□□□ 0.56
RARAP10276 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.54■□□□□ 0.56
RARAP10276 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.54■□□□□ 0.56
RARAP10276 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.54■□□□□ 0.56
RARAP10276 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.54■□□□□ 0.56
RARAP10276 DDX43P3-201ENST00000441064 443 ntBASIC18.54■□□□□ 0.56
RARAP10276 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.54■□□□□ 0.56
RARAP10276 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.54■□□□□ 0.56
RARAP10276 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.54■□□□□ 0.56
RARAP10276 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.54■□□□□ 0.56
RARAP10276 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RARAP10276 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RARAP10276 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RARAP10276 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RARAP10276 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RARAP10276 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RARAP10276 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.54■□□□□ 0.56
RARAP10276 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RARAP10276 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.54■□□□□ 0.56
RARAP10276 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RARAP10276 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.53■□□□□ 0.56
RARAP10276 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RARAP10276 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.53■□□□□ 0.56
RARAP10276 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms