Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SP9P0CG40 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SP9P0CG40 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SP9P0CG40 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.26■□□□□ 0.35
SP9P0CG40 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SP9P0CG40 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SP9P0CG40 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SP9P0CG40 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.26■□□□□ 0.35
SP9P0CG40 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SP9P0CG40 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SP9P0CG40 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SP9P0CG40 SPDYE7P-202ENST00000420373 878 ntBASIC17.26■□□□□ 0.35
SP9P0CG40 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SP9P0CG40 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SP9P0CG40 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SP9P0CG40 RN7SL692P-201ENST00000464677 288 ntBASIC17.26■□□□□ 0.35
SP9P0CG40 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SP9P0CG40 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.26■□□□□ 0.35
SP9P0CG40 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.26■□□□□ 0.35
SP9P0CG40 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.26■□□□□ 0.35
SP9P0CG40 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.26■□□□□ 0.35
SP9P0CG40 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SP9P0CG40 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SP9P0CG40 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SP9P0CG40 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SP9P0CG40 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SP9P0CG40 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SP9P0CG40 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SP9P0CG40 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SP9P0CG40 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SP9P0CG40 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SP9P0CG40 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.25■□□□□ 0.35
SP9P0CG40 AKAP8P1-201ENST00000434743 1349 ntBASIC17.25■□□□□ 0.35
SP9P0CG40 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SP9P0CG40 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SP9P0CG40 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SP9P0CG40 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SP9P0CG40 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SP9P0CG40 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SP9P0CG40 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SP9P0CG40 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.25■□□□□ 0.35
SP9P0CG40 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
SP9P0CG40 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.25■□□□□ 0.35
SP9P0CG40 PIN1P1-201ENST00000412108 996 ntBASIC17.25■□□□□ 0.35
SP9P0CG40 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SP9P0CG40 ACTG1P4-201ENST00000425123 1122 ntBASIC17.25■□□□□ 0.35
SP9P0CG40 SPCS2P4-201ENST00000436160 681 ntBASIC17.25■□□□□ 0.35
SP9P0CG40 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.25■□□□□ 0.35
SP9P0CG40 AC069120.2-201ENST00000524091 540 ntBASIC17.25■□□□□ 0.35
SP9P0CG40 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SP9P0CG40 RARRES2P8-201ENST00000566335 367 ntBASIC17.25■□□□□ 0.35
SP9P0CG40 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.25■□□□□ 0.35
SP9P0CG40 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SP9P0CG40 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SP9P0CG40 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.25■□□□□ 0.35
SP9P0CG40 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SP9P0CG40 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.25■□□□□ 0.35
SP9P0CG40 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SP9P0CG40 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.25■□□□□ 0.35
SP9P0CG40 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SP9P0CG40 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SP9P0CG40 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.25■□□□□ 0.35
SP9P0CG40 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SP9P0CG40 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SP9P0CG40 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SP9P0CG40 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
SP9P0CG40 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SP9P0CG40 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SP9P0CG40 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SP9P0CG40 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SP9P0CG40 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SP9P0CG40 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SP9P0CG40 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.24■□□□□ 0.35
SP9P0CG40 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.24■□□□□ 0.35
SP9P0CG40 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.24■□□□□ 0.35
SP9P0CG40 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.24■□□□□ 0.35
SP9P0CG40 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.24■□□□□ 0.35
SP9P0CG40 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.24■□□□□ 0.35
SP9P0CG40 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.24■□□□□ 0.35
SP9P0CG40 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.24■□□□□ 0.35
SP9P0CG40 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SP9P0CG40 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SP9P0CG40 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.24■□□□□ 0.35
SP9P0CG40 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SP9P0CG40 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.24■□□□□ 0.35
SP9P0CG40 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SP9P0CG40 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SP9P0CG40 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SP9P0CG40 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SP9P0CG40 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SP9P0CG40 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SP9P0CG40 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SP9P0CG40 AC129492.6-201ENST00000611383 1305 ntBASIC17.23■□□□□ 0.35
SP9P0CG40 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SP9P0CG40 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SP9P0CG40 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SP9P0CG40 PHGDH-209ENST00000641074 1780 ntBASIC17.23■□□□□ 0.35
SP9P0CG40 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SP9P0CG40 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SP9P0CG40 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms