Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LINGO3P0C6S8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.14■□□□□ 0.34
LINGO3P0C6S8 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.14■□□□□ 0.33
LINGO3P0C6S8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.14■□□□□ 0.33
LINGO3P0C6S8 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.14■□□□□ 0.33
LINGO3P0C6S8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.14■□□□□ 0.33
LINGO3P0C6S8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINGO3P0C6S8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LINGO3P0C6S8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
LINGO3P0C6S8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LINGO3P0C6S8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.14■□□□□ 0.33
LINGO3P0C6S8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.14■□□□□ 0.33
LINGO3P0C6S8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.14■□□□□ 0.33
LINGO3P0C6S8 C2orf69P3-201ENST00000565542 1120 ntBASIC17.14■□□□□ 0.33
LINGO3P0C6S8 AC010947.1-201ENST00000623454 693 ntBASIC17.14■□□□□ 0.33
LINGO3P0C6S8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINGO3P0C6S8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINGO3P0C6S8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINGO3P0C6S8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINGO3P0C6S8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINGO3P0C6S8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINGO3P0C6S8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LINGO3P0C6S8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINGO3P0C6S8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 TSPY14P-201ENST00000303979 915 ntBASIC17.13■□□□□ 0.33
LINGO3P0C6S8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.13■□□□□ 0.33
LINGO3P0C6S8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 AC087499.1-201ENST00000418141 1075 ntBASIC17.13■□□□□ 0.33
LINGO3P0C6S8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 NAPSB-206ENST00000562112 1266 ntBASIC17.13■□□□□ 0.33
LINGO3P0C6S8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 AL499627.1-201ENST00000569373 2188 ntBASIC17.13■□□□□ 0.33
LINGO3P0C6S8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.13■□□□□ 0.33
LINGO3P0C6S8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINGO3P0C6S8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 LYSMD4-203ENST00000378904 2122 ntBASIC17.12■□□□□ 0.33
LINGO3P0C6S8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 AC105917.1-201ENST00000506637 2539 ntBASIC17.12■□□□□ 0.33
LINGO3P0C6S8 MTMR9LP-203ENST00000426597 1545 ntBASIC17.12■□□□□ 0.33
LINGO3P0C6S8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 EGLN1P1-201ENST00000531623 762 ntBASIC17.12■□□□□ 0.33
LINGO3P0C6S8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 AC008622.2-201ENST00000617006 1229 ntBASIC17.12■□□□□ 0.33
LINGO3P0C6S8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 AC073912.3-201ENST00000624414 853 ntBASIC17.12■□□□□ 0.33
LINGO3P0C6S8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINGO3P0C6S8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms