Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CTSBP07858 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.72■□□□□ 0.27
CTSBP07858 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.72■□□□□ 0.27
CTSBP07858 AC116407.3-201ENST00000623905 1129 ntBASIC16.72■□□□□ 0.27
CTSBP07858 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSBP07858 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTSBP07858 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTSBP07858 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.72■□□□□ 0.27
CTSBP07858 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CTSBP07858 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTSBP07858 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSBP07858 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CTSBP07858 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTSBP07858 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CTSBP07858 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CTSBP07858 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSBP07858 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSBP07858 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CTSBP07858 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSBP07858 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.71■□□□□ 0.27
CTSBP07858 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.71■□□□□ 0.27
CTSBP07858 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.71■□□□□ 0.27
CTSBP07858 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CTSBP07858 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CTSBP07858 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTSBP07858 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.71■□□□□ 0.27
CTSBP07858 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSBP07858 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTSBP07858 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSBP07858 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSBP07858 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.71■□□□□ 0.27
CTSBP07858 OR7E14P-202ENST00000530490 1290 ntBASIC16.71■□□□□ 0.27
CTSBP07858 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.71■□□□□ 0.27
CTSBP07858 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.71■□□□□ 0.27
CTSBP07858 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTSBP07858 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.71■□□□□ 0.27
CTSBP07858 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CTSBP07858 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSBP07858 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSBP07858 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSBP07858 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CTSBP07858 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CTSBP07858 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CTSBP07858 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CTSBP07858 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CTSBP07858 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CTSBP07858 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
CTSBP07858 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CTSBP07858 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CTSBP07858 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.71■□□□□ 0.26
CTSBP07858 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSBP07858 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTSBP07858 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
CTSBP07858 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CTSBP07858 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSBP07858 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSBP07858 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.7■□□□□ 0.26
CTSBP07858 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.7■□□□□ 0.26
CTSBP07858 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSBP07858 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
CTSBP07858 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTSBP07858 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSBP07858 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.7■□□□□ 0.26
CTSBP07858 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSBP07858 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSBP07858 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.7■□□□□ 0.26
CTSBP07858 AP002414.3-201ENST00000589352 1468 ntBASIC16.7■□□□□ 0.26
CTSBP07858 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.7■□□□□ 0.26
CTSBP07858 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSBP07858 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.7■□□□□ 0.26
CTSBP07858 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.7■□□□□ 0.26
CTSBP07858 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.7■□□□□ 0.26
CTSBP07858 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.7■□□□□ 0.26
CTSBP07858 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CTSBP07858 STK25P1-201ENST00000585406 838 ntBASIC16.7■□□□□ 0.26
CTSBP07858 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.7■□□□□ 0.26
CTSBP07858 AL671883.3-201ENST00000603274 991 ntBASIC16.7■□□□□ 0.26
CTSBP07858 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTSBP07858 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSBP07858 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSBP07858 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSBP07858 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSBP07858 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTSBP07858 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTSBP07858 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CTSBP07858 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CTSBP07858 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTSBP07858 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTSBP07858 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.69■□□□□ 0.26
CTSBP07858 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.69■□□□□ 0.26
CTSBP07858 AC067852.2-201ENST00000590513 2313 ntBASIC16.69■□□□□ 0.26
CTSBP07858 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTSBP07858 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTSBP07858 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.69■□□□□ 0.26
CTSBP07858 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CTSBP07858 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CTSBP07858 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTSBP07858 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTSBP07858 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.69■□□□□ 0.26
CTSBP07858 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms