Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN1P07384 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN1P07384 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN1P07384 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.43■□□□□ 0.38
CAPN1P07384 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN1P07384 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN1P07384 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CAPN1P07384 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.43■□□□□ 0.38
CAPN1P07384 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN1P07384 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN1P07384 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN1P07384 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.43■□□□□ 0.38
CAPN1P07384 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPN1P07384 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.43■□□□□ 0.38
CAPN1P07384 AC139713.2-201ENST00000641328 2723 ntBASIC17.42■□□□□ 0.38
CAPN1P07384 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN1P07384 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.42■□□□□ 0.38
CAPN1P07384 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN1P07384 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CAPN1P07384 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN1P07384 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.42■□□□□ 0.38
CAPN1P07384 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.42■□□□□ 0.38
CAPN1P07384 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.42■□□□□ 0.38
CAPN1P07384 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CAPN1P07384 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.42■□□□□ 0.38
CAPN1P07384 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN1P07384 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
CAPN1P07384 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN1P07384 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN1P07384 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CAPN1P07384 TSPY22P-201ENST00000427496 604 ntBASIC17.42■□□□□ 0.38
CAPN1P07384 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN1P07384 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN1P07384 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.42■□□□□ 0.38
CAPN1P07384 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CAPN1P07384 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.42■□□□□ 0.38
CAPN1P07384 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN1P07384 LINC00602-201ENST00000629776 2065 ntBASIC17.42■□□□□ 0.38
CAPN1P07384 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CAPN1P07384 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN1P07384 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN1P07384 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN1P07384 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN1P07384 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN1P07384 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN1P07384 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN1P07384 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN1P07384 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CAPN1P07384 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CAPN1P07384 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPN1P07384 AL355312.1-201ENST00000407115 2176 ntBASIC17.42■□□□□ 0.38
CAPN1P07384 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.42■□□□□ 0.38
CAPN1P07384 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CAPN1P07384 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN1P07384 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN1P07384 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.41■□□□□ 0.38
CAPN1P07384 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CAPN1P07384 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN1P07384 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN1P07384 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN1P07384 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CAPN1P07384 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.41■□□□□ 0.38
CAPN1P07384 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN1P07384 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN1P07384 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.41■□□□□ 0.38
CAPN1P07384 CHCHD2P8-201ENST00000429873 447 ntBASIC17.41■□□□□ 0.38
CAPN1P07384 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.41■□□□□ 0.38
CAPN1P07384 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.41■□□□□ 0.38
CAPN1P07384 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.41■□□□□ 0.38
CAPN1P07384 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.41■□□□□ 0.38
CAPN1P07384 AP002414.4-201ENST00000589764 1148 ntBASIC17.41■□□□□ 0.38
CAPN1P07384 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.41■□□□□ 0.38
CAPN1P07384 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN1P07384 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN1P07384 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN1P07384 AL645608.8-201ENST00000606034 2086 ntBASIC17.41■□□□□ 0.38
CAPN1P07384 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CAPN1P07384 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN1P07384 AC022898.2-201ENST00000616822 1312 ntBASIC17.41■□□□□ 0.38
CAPN1P07384 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN1P07384 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN1P07384 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPN1P07384 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CAPN1P07384 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.4■□□□□ 0.38
CAPN1P07384 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.4■□□□□ 0.38
CAPN1P07384 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CAPN1P07384 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.4■□□□□ 0.38
CAPN1P07384 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.4■□□□□ 0.38
CAPN1P07384 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN1P07384 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN1P07384 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN1P07384 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CAPN1P07384 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN1P07384 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.4■□□□□ 0.38
CAPN1P07384 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.4■□□□□ 0.38
CAPN1P07384 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN1P07384 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.4■□□□□ 0.38
CAPN1P07384 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN1P07384 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CAPN1P07384 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms