Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOEP02649 KRT8P47-201ENST00000604727 1398 ntBASIC18.54■□□□□ 0.56
APOEP02649 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.54■□□□□ 0.56
APOEP02649 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
APOEP02649 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
APOEP02649 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.53■□□□□ 0.56
APOEP02649 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOEP02649 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
APOEP02649 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOEP02649 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOEP02649 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOEP02649 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.53■□□□□ 0.56
APOEP02649 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APOEP02649 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOEP02649 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
APOEP02649 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
APOEP02649 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOEP02649 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APOEP02649 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOEP02649 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOEP02649 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOEP02649 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOEP02649 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOEP02649 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
APOEP02649 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APOEP02649 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOEP02649 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOEP02649 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.53■□□□□ 0.56
APOEP02649 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOEP02649 AC096582.2-201ENST00000510860 516 ntBASIC18.53■□□□□ 0.56
APOEP02649 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOEP02649 AC009533.2-201ENST00000543664 586 ntBASIC18.53■□□□□ 0.56
APOEP02649 AL138831.2-201ENST00000606564 490 ntBASIC18.53■□□□□ 0.56
APOEP02649 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.53■□□□□ 0.56
APOEP02649 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
APOEP02649 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOEP02649 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APOEP02649 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOEP02649 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOEP02649 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOEP02649 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
APOEP02649 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APOEP02649 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
APOEP02649 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOEP02649 AC125634.1-201ENST00000438758 1403 ntBASIC18.52■□□□□ 0.56
APOEP02649 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOEP02649 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
APOEP02649 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
APOEP02649 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
APOEP02649 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOEP02649 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOEP02649 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APOEP02649 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
APOEP02649 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.52■□□□□ 0.56
APOEP02649 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.52■□□□□ 0.56
APOEP02649 FOSL1P1-201ENST00000511041 816 ntBASIC18.52■□□□□ 0.56
APOEP02649 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.52■□□□□ 0.56
APOEP02649 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.52■□□□□ 0.56
APOEP02649 AL121772.3-201ENST00000610840 674 ntBASIC18.52■□□□□ 0.56
APOEP02649 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOEP02649 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOEP02649 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.52■□□□□ 0.56
APOEP02649 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.52■□□□□ 0.56
APOEP02649 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.52■□□□□ 0.56
APOEP02649 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.52■□□□□ 0.56
APOEP02649 AC020916.1-201ENST00000587762 1774 ntBASIC18.52■□□□□ 0.55
APOEP02649 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
APOEP02649 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
APOEP02649 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
APOEP02649 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
APOEP02649 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
APOEP02649 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
APOEP02649 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
APOEP02649 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
APOEP02649 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.52■□□□□ 0.55
APOEP02649 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
APOEP02649 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOEP02649 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
APOEP02649 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOEP02649 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
APOEP02649 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.51■□□□□ 0.55
APOEP02649 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.51■□□□□ 0.55
APOEP02649 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.51■□□□□ 0.55
APOEP02649 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOEP02649 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOEP02649 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.51■□□□□ 0.55
APOEP02649 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APOEP02649 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.51■□□□□ 0.55
APOEP02649 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
APOEP02649 NUS1P2-201ENST00000417358 873 ntBASIC18.51■□□□□ 0.55
APOEP02649 POM121L3P-201ENST00000419331 1163 ntBASIC18.51■□□□□ 0.55
APOEP02649 DUSP5P1-201ENST00000441325 1139 ntBASIC18.51■□□□□ 0.55
APOEP02649 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.51■□□□□ 0.55
APOEP02649 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.51■□□□□ 0.55
APOEP02649 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.51■□□□□ 0.55
APOEP02649 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
APOEP02649 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms