Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
IFNA1P01562 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 AC034236.2-201ENST00000606662 1610 ntBASIC14.01□□□□□ -0.17
IFNA1P01562 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 AC103702.1-201ENST00000548801 2630 ntBASIC14.01□□□□□ -0.17
IFNA1P01562 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
IFNA1P01562 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 PCDHB17P-201ENST00000539533 2393 ntBASIC14.01□□□□□ -0.17
IFNA1P01562 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
IFNA1P01562 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.01□□□□□ -0.17
IFNA1P01562 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.01□□□□□ -0.17
IFNA1P01562 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.01□□□□□ -0.17
IFNA1P01562 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
IFNA1P01562 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
IFNA1P01562 LINC01451-201ENST00000623792 534 ntBASIC14.01□□□□□ -0.17
IFNA1P01562 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
IFNA1P01562 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
IFNA1P01562 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.01□□□□□ -0.17
IFNA1P01562 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 AC022188.1-201ENST00000620960 1664 ntBASIC14.01□□□□□ -0.17
IFNA1P01562 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
IFNA1P01562 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
IFNA1P01562 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
IFNA1P01562 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14□□□□□ -0.17
IFNA1P01562 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
IFNA1P01562 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14□□□□□ -0.17
IFNA1P01562 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14□□□□□ -0.17
IFNA1P01562 KRT8P50-201ENST00000562022 1438 ntBASIC14□□□□□ -0.17
IFNA1P01562 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
IFNA1P01562 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14□□□□□ -0.17
IFNA1P01562 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14□□□□□ -0.17
IFNA1P01562 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
IFNA1P01562 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
IFNA1P01562 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
IFNA1P01562 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14□□□□□ -0.17
IFNA1P01562 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14□□□□□ -0.17
IFNA1P01562 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14□□□□□ -0.17
IFNA1P01562 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14□□□□□ -0.17
IFNA1P01562 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14□□□□□ -0.17
IFNA1P01562 AC011767.1-201ENST00000617410 1153 ntBASIC14□□□□□ -0.17
IFNA1P01562 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 AC068418.2-201ENST00000577309 3703 ntBASIC14□□□□□ -0.17
IFNA1P01562 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
IFNA1P01562 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
IFNA1P01562 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14□□□□□ -0.17
IFNA1P01562 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14□□□□□ -0.17
IFNA1P01562 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
IFNA1P01562 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14□□□□□ -0.17
IFNA1P01562 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC13.99□□□□□ -0.17
IFNA1P01562 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
IFNA1P01562 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
IFNA1P01562 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IFNA1P01562 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms