Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.23■□□□□ 0.35
TNFP01375 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.23■□□□□ 0.35
TNFP01375 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.23■□□□□ 0.35
TNFP01375 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
TNFP01375 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.23■□□□□ 0.35
TNFP01375 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.23■□□□□ 0.35
TNFP01375 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.23■□□□□ 0.35
TNFP01375 AC009113.1-201ENST00000570267 2443 ntBASIC17.23■□□□□ 0.35
TNFP01375 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TNFP01375 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFP01375 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFP01375 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.23■□□□□ 0.35
TNFP01375 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.23■□□□□ 0.35
TNFP01375 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFP01375 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFP01375 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFP01375 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
TNFP01375 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFP01375 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFP01375 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFP01375 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFP01375 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFP01375 AC138028.4-201ENST00000564984 1845 ntBASIC17.22■□□□□ 0.35
TNFP01375 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFP01375 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TNFP01375 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFP01375 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.22■□□□□ 0.35
TNFP01375 POLD2P1-201ENST00000511220 997 ntBASIC17.22■□□□□ 0.35
TNFP01375 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.22■□□□□ 0.35
TNFP01375 STK25P1-201ENST00000585406 838 ntBASIC17.22■□□□□ 0.35
TNFP01375 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TNFP01375 AL356488.2-201ENST00000602755 427 ntBASIC17.22■□□□□ 0.35
TNFP01375 Z83851.2-201ENST00000609564 659 ntBASIC17.22■□□□□ 0.35
TNFP01375 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.22■□□□□ 0.35
TNFP01375 AC005593.1-201ENST00000624894 515 ntBASIC17.22■□□□□ 0.35
TNFP01375 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFP01375 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNFP01375 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFP01375 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFP01375 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.22■□□□□ 0.35
TNFP01375 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFP01375 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFP01375 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.21■□□□□ 0.35
TNFP01375 PMS2P7-201ENST00000506558 1336 ntBASIC17.21■□□□□ 0.35
TNFP01375 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TNFP01375 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFP01375 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TNFP01375 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFP01375 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
TNFP01375 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFP01375 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
TNFP01375 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFP01375 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFP01375 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TNFP01375 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFP01375 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFP01375 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFP01375 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TNFP01375 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFP01375 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TNFP01375 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFP01375 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFP01375 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.21■□□□□ 0.35
TNFP01375 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFP01375 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TNFP01375 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFP01375 MYCLP1-201ENST00000372451 1075 ntBASIC17.21■□□□□ 0.35
TNFP01375 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
TNFP01375 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.21■□□□□ 0.35
TNFP01375 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.21■□□□□ 0.35
TNFP01375 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TNFP01375 AC002558.1-201ENST00000488906 803 ntBASIC17.21■□□□□ 0.35
TNFP01375 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.21■□□□□ 0.35
TNFP01375 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFP01375 UNC93B6-202ENST00000528242 690 ntBASIC17.21■□□□□ 0.35
TNFP01375 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFP01375 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFP01375 AC027601.4-201ENST00000611259 610 ntBASIC17.21■□□□□ 0.35
TNFP01375 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFP01375 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TNFP01375 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFP01375 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TNFP01375 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFP01375 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TNFP01375 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TNFP01375 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TNFP01375 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TNFP01375 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TNFP01375 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFP01375 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFP01375 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFP01375 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFP01375 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFP01375 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.2■□□□□ 0.34
TNFP01375 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.2■□□□□ 0.34
TNFP01375 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.2■□□□□ 0.34
TNFP01375 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.2■□□□□ 0.34
TNFP01375 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.2■□□□□ 0.34
TNFP01375 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.2■□□□□ 0.34
TNFP01375 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms