Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 TSPY17P-201ENST00000450329 467 ntBASIC20.28■□□□□ 0.84
MBD3O95983 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.28■□□□□ 0.84
MBD3O95983 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.28■□□□□ 0.84
MBD3O95983 AL353719.1-201ENST00000566847 864 ntBASIC20.28■□□□□ 0.84
MBD3O95983 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MBD3O95983 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MBD3O95983 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MBD3O95983 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MBD3O95983 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MBD3O95983 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.28■□□□□ 0.84
MBD3O95983 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
MBD3O95983 LINC01311-201ENST00000565162 1445 ntBASIC20.27■□□□□ 0.84
MBD3O95983 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MBD3O95983 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MBD3O95983 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
MBD3O95983 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.27■□□□□ 0.84
MBD3O95983 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MBD3O95983 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
MBD3O95983 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.27■□□□□ 0.84
MBD3O95983 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MBD3O95983 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.27■□□□□ 0.84
MBD3O95983 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MBD3O95983 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MBD3O95983 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MBD3O95983 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MBD3O95983 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MBD3O95983 SLC25A1P2-201ENST00000430693 912 ntBASIC20.27■□□□□ 0.84
MBD3O95983 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.27■□□□□ 0.84
MBD3O95983 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MBD3O95983 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.27■□□□□ 0.84
MBD3O95983 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
MBD3O95983 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.27■□□□□ 0.84
MBD3O95983 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
MBD3O95983 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
MBD3O95983 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
MBD3O95983 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
MBD3O95983 AL135905.2-201ENST00000584934 1404 ntBASIC20.27■□□□□ 0.83
MBD3O95983 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
MBD3O95983 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MBD3O95983 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD3O95983 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD3O95983 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
MBD3O95983 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MBD3O95983 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
MBD3O95983 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD3O95983 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD3O95983 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD3O95983 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD3O95983 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD3O95983 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.26■□□□□ 0.83
MBD3O95983 KRT8P47-201ENST00000604727 1398 ntBASIC20.26■□□□□ 0.83
MBD3O95983 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.26■□□□□ 0.83
MBD3O95983 AC005104.2-201ENST00000427818 678 ntBASIC20.26■□□□□ 0.83
MBD3O95983 RPPH1-201ENST00000516869 333 ntBASIC20.26■□□□□ 0.83
MBD3O95983 AP005242.2-201ENST00000580065 1175 ntBASIC20.26■□□□□ 0.83
MBD3O95983 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD3O95983 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.26■□□□□ 0.83
MBD3O95983 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.26■□□□□ 0.83
MBD3O95983 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD3O95983 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
MBD3O95983 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD3O95983 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
MBD3O95983 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD3O95983 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MBD3O95983 CROCCP1-201ENST00000426910 5675 ntBASIC20.26■□□□□ 0.83
MBD3O95983 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MBD3O95983 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.25■□□□□ 0.83
MBD3O95983 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.25■□□□□ 0.83
MBD3O95983 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MBD3O95983 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.25■□□□□ 0.83
MBD3O95983 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
MBD3O95983 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
MBD3O95983 CICP6-201ENST00000457191 2729 ntBASIC20.25■□□□□ 0.83
MBD3O95983 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MBD3O95983 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MBD3O95983 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
MBD3O95983 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.25■□□□□ 0.83
MBD3O95983 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.25■□□□□ 0.83
MBD3O95983 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.25■□□□□ 0.83
MBD3O95983 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MBD3O95983 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
MBD3O95983 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.25■□□□□ 0.83
MBD3O95983 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.25■□□□□ 0.83
MBD3O95983 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.25■□□□□ 0.83
MBD3O95983 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
MBD3O95983 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MBD3O95983 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MBD3O95983 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.25■□□□□ 0.83
MBD3O95983 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MBD3O95983 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MBD3O95983 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MBD3O95983 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
MBD3O95983 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
MBD3O95983 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MBD3O95983 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
MBD3O95983 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.25■□□□□ 0.83
MBD3O95983 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.25■□□□□ 0.83
MBD3O95983 LINC02012-201ENST00000608206 1725 ntBASIC20.24■□□□□ 0.83
MBD3O95983 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
MBD3O95983 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms