Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRUB2O95900 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRUB2O95900 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRUB2O95900 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
TRUB2O95900 HLA-J-201ENST00000462773 1622 ntBASIC18.52■□□□□ 0.55
TRUB2O95900 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRUB2O95900 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB2O95900 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.51■□□□□ 0.55
TRUB2O95900 HTR7P1-202ENST00000624664 4411 ntBASIC18.51■□□□□ 0.55
TRUB2O95900 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TRUB2O95900 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB2O95900 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB2O95900 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB2O95900 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB2O95900 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB2O95900 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TRUB2O95900 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.51■□□□□ 0.55
TRUB2O95900 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.51■□□□□ 0.55
TRUB2O95900 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.51■□□□□ 0.55
TRUB2O95900 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.51■□□□□ 0.55
TRUB2O95900 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.51■□□□□ 0.55
TRUB2O95900 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.51■□□□□ 0.55
TRUB2O95900 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.51■□□□□ 0.55
TRUB2O95900 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB2O95900 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB2O95900 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB2O95900 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.51■□□□□ 0.55
TRUB2O95900 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB2O95900 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB2O95900 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB2O95900 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.5■□□□□ 0.55
TRUB2O95900 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB2O95900 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB2O95900 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRUB2O95900 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.5■□□□□ 0.55
TRUB2O95900 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB2O95900 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB2O95900 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB2O95900 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB2O95900 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB2O95900 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB2O95900 NUS1P2-201ENST00000417358 873 ntBASIC18.5■□□□□ 0.55
TRUB2O95900 DUSP5P1-201ENST00000441325 1139 ntBASIC18.5■□□□□ 0.55
TRUB2O95900 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.5■□□□□ 0.55
TRUB2O95900 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.5■□□□□ 0.55
TRUB2O95900 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.5■□□□□ 0.55
TRUB2O95900 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.5■□□□□ 0.55
TRUB2O95900 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB2O95900 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB2O95900 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.5■□□□□ 0.55
TRUB2O95900 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB2O95900 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB2O95900 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB2O95900 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB2O95900 AC139713.2-201ENST00000641328 2723 ntBASIC18.5■□□□□ 0.55
TRUB2O95900 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB2O95900 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
TRUB2O95900 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB2O95900 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB2O95900 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB2O95900 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.49■□□□□ 0.55
TRUB2O95900 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB2O95900 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.49■□□□□ 0.55
TRUB2O95900 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB2O95900 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB2O95900 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
TRUB2O95900 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB2O95900 RCN1P2-201ENST00000398357 915 ntBASIC18.49■□□□□ 0.55
TRUB2O95900 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.49■□□□□ 0.55
TRUB2O95900 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.49■□□□□ 0.55
TRUB2O95900 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB2O95900 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.49■□□□□ 0.55
TRUB2O95900 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB2O95900 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB2O95900 AC011467.2-201ENST00000598425 242 ntBASIC18.49■□□□□ 0.55
TRUB2O95900 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.49■□□□□ 0.55
TRUB2O95900 AC114341.1-201ENST00000618070 349 ntBASIC18.49■□□□□ 0.55
TRUB2O95900 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.49■□□□□ 0.55
TRUB2O95900 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB2O95900 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TRUB2O95900 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
TRUB2O95900 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.49■□□□□ 0.55
TRUB2O95900 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB2O95900 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.49■□□□□ 0.55
TRUB2O95900 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB2O95900 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TRUB2O95900 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB2O95900 AL645608.8-201ENST00000606034 2086 ntBASIC18.49■□□□□ 0.55
TRUB2O95900 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB2O95900 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB2O95900 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB2O95900 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB2O95900 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB2O95900 BX276092.7-203ENST00000637198 1536 ntBASIC18.49■□□□□ 0.55
TRUB2O95900 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB2O95900 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.48■□□□□ 0.55
TRUB2O95900 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRUB2O95900 AC141586.5-201ENST00000624546 2050 ntBASIC18.48■□□□□ 0.55
TRUB2O95900 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRUB2O95900 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms