Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTN3O95197 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN3O95197 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN3O95197 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.62■□□□□ 0.57
RTN3O95197 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.62■□□□□ 0.57
RTN3O95197 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.62■□□□□ 0.57
RTN3O95197 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN3O95197 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.62■□□□□ 0.57
RTN3O95197 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTN3O95197 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.62■□□□□ 0.57
RTN3O95197 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN3O95197 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN3O95197 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN3O95197 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RTN3O95197 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
RTN3O95197 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTN3O95197 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RTN3O95197 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
RTN3O95197 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTN3O95197 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTN3O95197 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTN3O95197 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.61■□□□□ 0.57
RTN3O95197 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.61■□□□□ 0.57
RTN3O95197 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.61■□□□□ 0.57
RTN3O95197 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RTN3O95197 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.61■□□□□ 0.57
RTN3O95197 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RTN3O95197 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTN3O95197 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RTN3O95197 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTN3O95197 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.61■□□□□ 0.57
RTN3O95197 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTN3O95197 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.61■□□□□ 0.57
RTN3O95197 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTN3O95197 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTN3O95197 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTN3O95197 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.61■□□□□ 0.57
RTN3O95197 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.61■□□□□ 0.57
RTN3O95197 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.61■□□□□ 0.57
RTN3O95197 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTN3O95197 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.61■□□□□ 0.57
RTN3O95197 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTN3O95197 FGFR3P6-201ENST00000457012 610 ntBASIC18.61■□□□□ 0.57
RTN3O95197 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RTN3O95197 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.61■□□□□ 0.57
RTN3O95197 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTN3O95197 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RTN3O95197 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTN3O95197 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTN3O95197 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RTN3O95197 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTN3O95197 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.61■□□□□ 0.57
RTN3O95197 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.61■□□□□ 0.57
RTN3O95197 AC100803.2-201ENST00000562459 1963 ntBASIC18.61■□□□□ 0.57
RTN3O95197 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.61■□□□□ 0.57
RTN3O95197 ABALON-201ENST00000629058 1903 ntBASIC18.61■□□□□ 0.57
RTN3O95197 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTN3O95197 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.6■□□□□ 0.57
RTN3O95197 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTN3O95197 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTN3O95197 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTN3O95197 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RTN3O95197 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTN3O95197 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RTN3O95197 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.6■□□□□ 0.57
RTN3O95197 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTN3O95197 KRT18P55-202ENST00000578578 1546 ntBASIC18.6■□□□□ 0.57
RTN3O95197 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.6■□□□□ 0.57
RTN3O95197 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.6■□□□□ 0.57
RTN3O95197 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTN3O95197 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTN3O95197 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RTN3O95197 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RTN3O95197 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTN3O95197 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTN3O95197 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RTN3O95197 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
RTN3O95197 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.6■□□□□ 0.57
RTN3O95197 FAM197Y8-203ENST00000450145 560 ntBASIC18.6■□□□□ 0.57
RTN3O95197 TP73-AS1-207ENST00000624167 988 ntBASIC18.6■□□□□ 0.57
RTN3O95197 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RTN3O95197 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RTN3O95197 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RTN3O95197 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.6■□□□□ 0.57
RTN3O95197 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RTN3O95197 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.6■□□□□ 0.57
RTN3O95197 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTN3O95197 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.6■□□□□ 0.57
RTN3O95197 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.6■□□□□ 0.57
RTN3O95197 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTN3O95197 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RTN3O95197 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTN3O95197 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RTN3O95197 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RTN3O95197 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RTN3O95197 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
RTN3O95197 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTN3O95197 BX276092.7-203ENST00000637198 1536 ntBASIC18.59■□□□□ 0.57
RTN3O95197 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTN3O95197 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms