Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALX3O95076 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALX3O95076 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALX3O95076 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ALX3O95076 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.68■□□□□ 0.1
ALX3O95076 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALX3O95076 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALX3O95076 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALX3O95076 CCR12P-201ENST00000446203 998 ntBASIC15.68■□□□□ 0.1
ALX3O95076 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALX3O95076 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALX3O95076 DUTP2-201ENST00000519164 463 ntBASIC15.68■□□□□ 0.1
ALX3O95076 AL445228.2-201ENST00000605589 952 ntBASIC15.68■□□□□ 0.1
ALX3O95076 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ALX3O95076 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ALX3O95076 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALX3O95076 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
ALX3O95076 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
ALX3O95076 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ALX3O95076 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALX3O95076 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALX3O95076 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.68■□□□□ 0.1
ALX3O95076 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.68■□□□□ 0.1
ALX3O95076 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALX3O95076 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALX3O95076 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALX3O95076 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALX3O95076 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
ALX3O95076 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.67■□□□□ 0.1
ALX3O95076 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALX3O95076 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ALX3O95076 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ALX3O95076 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.67■□□□□ 0.1
ALX3O95076 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALX3O95076 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.67■□□□□ 0.1
ALX3O95076 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.67■□□□□ 0.1
ALX3O95076 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ALX3O95076 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ALX3O95076 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALX3O95076 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALX3O95076 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ALX3O95076 UNC93B2-201ENST00000285383 730 ntBASIC15.67■□□□□ 0.1
ALX3O95076 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALX3O95076 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALX3O95076 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.67■□□□□ 0.1
ALX3O95076 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALX3O95076 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALX3O95076 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ALX3O95076 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.67■□□□□ 0.1
ALX3O95076 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.67■□□□□ 0.1
ALX3O95076 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.67■□□□□ 0.1
ALX3O95076 BX088651.1-201ENST00000540551 451 ntBASIC15.67■□□□□ 0.1
ALX3O95076 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.67■□□□□ 0.1
ALX3O95076 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.67■□□□□ 0.1
ALX3O95076 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.67■□□□□ 0.1
ALX3O95076 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ALX3O95076 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.67■□□□□ 0.1
ALX3O95076 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.67■□□□□ 0.1
ALX3O95076 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALX3O95076 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
ALX3O95076 LINC02228-204ENST00000642115 2962 ntBASIC15.67■□□□□ 0.1
ALX3O95076 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ALX3O95076 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.67■□□□□ 0.1
ALX3O95076 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.67■□□□□ 0.1
ALX3O95076 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALX3O95076 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.67■□□□□ 0.1
ALX3O95076 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ALX3O95076 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALX3O95076 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALX3O95076 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ALX3O95076 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.66■□□□□ 0.1
ALX3O95076 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.66■□□□□ 0.1
ALX3O95076 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ALX3O95076 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ALX3O95076 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ALX3O95076 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ALX3O95076 AL023806.1-201ENST00000603994 1649 ntBASIC15.66■□□□□ 0.1
ALX3O95076 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ALX3O95076 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
ALX3O95076 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.66■□□□□ 0.1
ALX3O95076 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.66■□□□□ 0.1
ALX3O95076 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.66■□□□□ 0.1
ALX3O95076 SNORA78-201ENST00000459373 127 ntBASIC15.66■□□□□ 0.1
ALX3O95076 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ALX3O95076 AP003071.4-201ENST00000562276 1284 ntBASIC15.66■□□□□ 0.1
ALX3O95076 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ALX3O95076 AC010653.2-201ENST00000623505 997 ntBASIC15.66■□□□□ 0.1
ALX3O95076 AC112497.1-201ENST00000624824 639 ntBASIC15.66■□□□□ 0.1
ALX3O95076 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ALX3O95076 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ALX3O95076 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ALX3O95076 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ALX3O95076 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
ALX3O95076 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
ALX3O95076 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.66■□□□□ 0.1
ALX3O95076 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ALX3O95076 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.66■□□□□ 0.1
ALX3O95076 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ALX3O95076 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ALX3O95076 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms