Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.57■□□□□ 0.08
KDM4BO94953 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
KDM4BO94953 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
KDM4BO94953 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.57■□□□□ 0.08
KDM4BO94953 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.57■□□□□ 0.08
KDM4BO94953 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.57■□□□□ 0.08
KDM4BO94953 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 AL390955.1-201ENST00000428694 934 ntBASIC15.57■□□□□ 0.08
KDM4BO94953 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.57■□□□□ 0.08
KDM4BO94953 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.57■□□□□ 0.08
KDM4BO94953 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.57■□□□□ 0.08
KDM4BO94953 C2orf69P3-201ENST00000565542 1120 ntBASIC15.57■□□□□ 0.08
KDM4BO94953 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
KDM4BO94953 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
KDM4BO94953 KRT17P2-201ENST00000300992 1314 ntBASIC15.57■□□□□ 0.08
KDM4BO94953 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
KDM4BO94953 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
KDM4BO94953 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
KDM4BO94953 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.57■□□□□ 0.08
KDM4BO94953 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
KDM4BO94953 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
KDM4BO94953 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.56■□□□□ 0.08
KDM4BO94953 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM4BO94953 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
KDM4BO94953 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM4BO94953 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
KDM4BO94953 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
KDM4BO94953 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
KDM4BO94953 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM4BO94953 MIR1238-201ENST00000408483 83 ntBASIC15.56■□□□□ 0.08
KDM4BO94953 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.56■□□□□ 0.08
KDM4BO94953 AC007663.1-201ENST00000438948 1240 ntBASIC15.56■□□□□ 0.08
KDM4BO94953 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.56■□□□□ 0.08
KDM4BO94953 SNORA78-201ENST00000459373 127 ntBASIC15.56■□□□□ 0.08
KDM4BO94953 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.56■□□□□ 0.08
KDM4BO94953 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.56■□□□□ 0.08
KDM4BO94953 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.56■□□□□ 0.08
KDM4BO94953 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.56■□□□□ 0.08
KDM4BO94953 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KDM4BO94953 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.56■□□□□ 0.08
KDM4BO94953 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.56■□□□□ 0.08
KDM4BO94953 AC010653.2-201ENST00000623505 997 ntBASIC15.56■□□□□ 0.08
KDM4BO94953 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM4BO94953 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KDM4BO94953 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM4BO94953 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KDM4BO94953 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.56■□□□□ 0.08
KDM4BO94953 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.56■□□□□ 0.08
KDM4BO94953 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM4BO94953 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.56■□□□□ 0.08
KDM4BO94953 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM4BO94953 AL356309.3-201ENST00000624132 1934 ntBASIC15.56■□□□□ 0.08
KDM4BO94953 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
KDM4BO94953 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM4BO94953 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
KDM4BO94953 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KDM4BO94953 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KDM4BO94953 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM4BO94953 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM4BO94953 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
KDM4BO94953 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.56■□□□□ 0.08
KDM4BO94953 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
KDM4BO94953 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
KDM4BO94953 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
KDM4BO94953 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.55■□□□□ 0.08
KDM4BO94953 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
KDM4BO94953 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
KDM4BO94953 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KDM4BO94953 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
KDM4BO94953 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
KDM4BO94953 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
KDM4BO94953 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
KDM4BO94953 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
KDM4BO94953 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.55■□□□□ 0.08
KDM4BO94953 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
KDM4BO94953 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.55■□□□□ 0.08
KDM4BO94953 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
KDM4BO94953 AL355075.4-201ENST00000554988 638 ntBASIC15.55■□□□□ 0.08
KDM4BO94953 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms