Protein–RNA interactions for Protein: O94788

ALDH1A2, Retinal dehydrogenase 2, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A2O94788 AF228730.7-201ENST00000641842 219 ntBASIC18.36■□□□□ 0.53
ALDH1A2O94788 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALDH1A2O94788 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
ALDH1A2O94788 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALDH1A2O94788 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A2O94788 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.35■□□□□ 0.53
ALDH1A2O94788 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A2O94788 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.35■□□□□ 0.53
ALDH1A2O94788 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A2O94788 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A2O94788 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A2O94788 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.35■□□□□ 0.53
ALDH1A2O94788 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A2O94788 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ALDH1A2O94788 KRT18P55-202ENST00000578578 1546 ntBASIC18.35■□□□□ 0.53
ALDH1A2O94788 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A2O94788 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.35■□□□□ 0.53
ALDH1A2O94788 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A2O94788 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A2O94788 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
ALDH1A2O94788 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A2O94788 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
ALDH1A2O94788 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.35■□□□□ 0.53
ALDH1A2O94788 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ALDH1A2O94788 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A2O94788 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ALDH1A2O94788 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A2O94788 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ALDH1A2O94788 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A2O94788 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ALDH1A2O94788 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A2O94788 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.34■□□□□ 0.53
ALDH1A2O94788 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A2O94788 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A2O94788 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A2O94788 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
ALDH1A2O94788 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A2O94788 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A2O94788 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.34■□□□□ 0.53
ALDH1A2O94788 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ALDH1A2O94788 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A2O94788 AC132008.2-207ENST00000454517 770 ntBASIC18.34■□□□□ 0.53
ALDH1A2O94788 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.34■□□□□ 0.53
ALDH1A2O94788 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ALDH1A2O94788 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.34■□□□□ 0.53
ALDH1A2O94788 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.34■□□□□ 0.53
ALDH1A2O94788 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A2O94788 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.34■□□□□ 0.53
ALDH1A2O94788 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.34■□□□□ 0.53
ALDH1A2O94788 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A2O94788 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A2O94788 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A2O94788 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A2O94788 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A2O94788 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.34■□□□□ 0.53
ALDH1A2O94788 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
ALDH1A2O94788 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALDH1A2O94788 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALDH1A2O94788 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALDH1A2O94788 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.33■□□□□ 0.53
ALDH1A2O94788 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALDH1A2O94788 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALDH1A2O94788 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ALDH1A2O94788 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
ALDH1A2O94788 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ALDH1A2O94788 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A2O94788 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A2O94788 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A2O94788 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.33■□□□□ 0.52
ALDH1A2O94788 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.33■□□□□ 0.52
ALDH1A2O94788 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A2O94788 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A2O94788 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.33■□□□□ 0.52
ALDH1A2O94788 AC073648.2-201ENST00000510116 352 ntBASIC18.33■□□□□ 0.52
ALDH1A2O94788 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.33■□□□□ 0.52
ALDH1A2O94788 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.33■□□□□ 0.52
ALDH1A2O94788 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ALDH1A2O94788 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A2O94788 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A2O94788 AC090340.1-201ENST00000620778 4980 ntBASIC18.33■□□□□ 0.52
ALDH1A2O94788 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.33■□□□□ 0.52
ALDH1A2O94788 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.33■□□□□ 0.52
ALDH1A2O94788 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A2O94788 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A2O94788 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A2O94788 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.33■□□□□ 0.52
ALDH1A2O94788 AL024508.2-201ENST00000607749 1894 ntBASIC18.33■□□□□ 0.52
ALDH1A2O94788 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A2O94788 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.33■□□□□ 0.52
ALDH1A2O94788 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A2O94788 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ALDH1A2O94788 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A2O94788 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
ALDH1A2O94788 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ALDH1A2O94788 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A2O94788 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A2O94788 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A2O94788 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A2O94788 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A2O94788 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms