Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN11O75508 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN11O75508 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN11O75508 AC003669.1-201ENST00000334569 611 ntBASIC18.04■□□□□ 0.48
CLDN11O75508 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.04■□□□□ 0.48
CLDN11O75508 AC026396.1-201ENST00000419388 421 ntBASIC18.04■□□□□ 0.48
CLDN11O75508 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN11O75508 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN11O75508 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN11O75508 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN11O75508 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN11O75508 SIGLEC16-201ENST00000599858 1437 ntBASIC18.04■□□□□ 0.48
CLDN11O75508 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN11O75508 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN11O75508 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN11O75508 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN11O75508 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN11O75508 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN11O75508 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN11O75508 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN11O75508 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN11O75508 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN11O75508 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN11O75508 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN11O75508 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN11O75508 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN11O75508 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN11O75508 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN11O75508 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN11O75508 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN11O75508 AC132938.5-201ENST00000624980 1813 ntBASIC18.03■□□□□ 0.48
CLDN11O75508 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CLDN11O75508 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
CLDN11O75508 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CLDN11O75508 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN11O75508 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN11O75508 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN11O75508 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
CLDN11O75508 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CLDN11O75508 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN11O75508 SPDYE21P-201ENST00000413323 827 ntBASIC18.03■□□□□ 0.48
CLDN11O75508 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CLDN11O75508 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CLDN11O75508 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLDN11O75508 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.03■□□□□ 0.48
CLDN11O75508 STK25P1-201ENST00000585406 838 ntBASIC18.03■□□□□ 0.48
CLDN11O75508 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN11O75508 AC064862.7-201ENST00000604520 867 ntBASIC18.03■□□□□ 0.48
CLDN11O75508 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN11O75508 AC090340.1-201ENST00000620778 4980 ntBASIC18.03■□□□□ 0.48
CLDN11O75508 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CLDN11O75508 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN11O75508 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN11O75508 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CLDN11O75508 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CLDN11O75508 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN11O75508 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN11O75508 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN11O75508 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN11O75508 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN11O75508 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN11O75508 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN11O75508 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN11O75508 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN11O75508 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN11O75508 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN11O75508 AL020989.1-201ENST00000422979 469 ntBASIC18.02■□□□□ 0.48
CLDN11O75508 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
CLDN11O75508 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN11O75508 FAM197Y8-203ENST00000450145 560 ntBASIC18.02■□□□□ 0.48
CLDN11O75508 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.02■□□□□ 0.48
CLDN11O75508 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN11O75508 TP73-AS1-207ENST00000624167 988 ntBASIC18.02■□□□□ 0.48
CLDN11O75508 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN11O75508 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN11O75508 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN11O75508 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN11O75508 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN11O75508 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CLDN11O75508 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN11O75508 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.02■□□□□ 0.47
CLDN11O75508 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN11O75508 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN11O75508 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN11O75508 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CLDN11O75508 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CLDN11O75508 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CLDN11O75508 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN11O75508 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.01■□□□□ 0.47
CLDN11O75508 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN11O75508 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN11O75508 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN11O75508 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN11O75508 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN11O75508 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN11O75508 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN11O75508 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.01■□□□□ 0.47
CLDN11O75508 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN11O75508 KLF4P1-201ENST00000412782 1185 ntBASIC18.01■□□□□ 0.47
CLDN11O75508 AC073648.2-201ENST00000510116 352 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms