Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.57■□□□□ 0.72
LGR5O75473 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LGR5O75473 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LGR5O75473 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LGR5O75473 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LGR5O75473 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.57■□□□□ 0.72
LGR5O75473 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LGR5O75473 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.57■□□□□ 0.72
LGR5O75473 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LGR5O75473 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LGR5O75473 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LGR5O75473 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LGR5O75473 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LGR5O75473 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LGR5O75473 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LGR5O75473 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LGR5O75473 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.57■□□□□ 0.72
LGR5O75473 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.57■□□□□ 0.72
LGR5O75473 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.57■□□□□ 0.72
LGR5O75473 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.57■□□□□ 0.72
LGR5O75473 AC010327.4-202ENST00000591484 748 ntBASIC19.57■□□□□ 0.72
LGR5O75473 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LGR5O75473 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LGR5O75473 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.57■□□□□ 0.72
LGR5O75473 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LGR5O75473 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LGR5O75473 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.57■□□□□ 0.72
LGR5O75473 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LGR5O75473 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.57■□□□□ 0.72
LGR5O75473 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
LGR5O75473 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
LGR5O75473 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LGR5O75473 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LGR5O75473 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.56■□□□□ 0.72
LGR5O75473 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.56■□□□□ 0.72
LGR5O75473 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
LGR5O75473 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.56■□□□□ 0.72
LGR5O75473 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
LGR5O75473 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LGR5O75473 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LGR5O75473 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LGR5O75473 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.56■□□□□ 0.72
LGR5O75473 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LGR5O75473 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LGR5O75473 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.56■□□□□ 0.72
LGR5O75473 STK19B-204ENST00000512515 211 ntBASIC19.56■□□□□ 0.72
LGR5O75473 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.56■□□□□ 0.72
LGR5O75473 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.56■□□□□ 0.72
LGR5O75473 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.56■□□□□ 0.72
LGR5O75473 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.56■□□□□ 0.72
LGR5O75473 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LGR5O75473 AC009336.1-201ENST00000608941 1553 ntBASIC19.56■□□□□ 0.72
LGR5O75473 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.56■□□□□ 0.72
LGR5O75473 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LGR5O75473 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LGR5O75473 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LGR5O75473 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
LGR5O75473 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LGR5O75473 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LGR5O75473 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LGR5O75473 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LGR5O75473 AC005332.8-201ENST00000622750 2735 ntBASIC19.55■□□□□ 0.72
LGR5O75473 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LGR5O75473 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.55■□□□□ 0.72
LGR5O75473 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LGR5O75473 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LGR5O75473 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LGR5O75473 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.55■□□□□ 0.72
LGR5O75473 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.55■□□□□ 0.72
LGR5O75473 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LGR5O75473 RPSAP43-201ENST00000402237 625 ntBASIC19.55■□□□□ 0.72
LGR5O75473 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.55■□□□□ 0.72
LGR5O75473 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.55■□□□□ 0.72
LGR5O75473 AC009947.1-201ENST00000444350 727 ntBASIC19.55■□□□□ 0.72
LGR5O75473 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.55■□□□□ 0.72
LGR5O75473 AC136632.2-201ENST00000512891 861 ntBASIC19.55■□□□□ 0.72
LGR5O75473 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.55■□□□□ 0.72
LGR5O75473 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.55■□□□□ 0.72
LGR5O75473 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.55■□□□□ 0.72
LGR5O75473 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.55■□□□□ 0.72
LGR5O75473 PGM5P2-202ENST00000637225 1043 ntBASIC19.55■□□□□ 0.72
LGR5O75473 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.55■□□□□ 0.72
LGR5O75473 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LGR5O75473 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LGR5O75473 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LGR5O75473 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LGR5O75473 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.55■□□□□ 0.72
LGR5O75473 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.55■□□□□ 0.72
LGR5O75473 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
LGR5O75473 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.55■□□□□ 0.72
LGR5O75473 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LGR5O75473 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LGR5O75473 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.54■□□□□ 0.72
LGR5O75473 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.54■□□□□ 0.72
LGR5O75473 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LGR5O75473 NCF1C-201ENST00000438382 1427 ntBASIC19.54■□□□□ 0.72
LGR5O75473 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
LGR5O75473 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LGR5O75473 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LGR5O75473 MYCLP1-201ENST00000372451 1075 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms