Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.41■□□□□ 0.38
EDF1O60869 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.41■□□□□ 0.38
EDF1O60869 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.41■□□□□ 0.38
EDF1O60869 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EDF1O60869 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.41■□□□□ 0.38
EDF1O60869 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EDF1O60869 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EDF1O60869 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EDF1O60869 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EDF1O60869 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
EDF1O60869 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EDF1O60869 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
EDF1O60869 KRT8P47-201ENST00000604727 1398 ntBASIC17.4■□□□□ 0.38
EDF1O60869 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.4■□□□□ 0.38
EDF1O60869 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 AC097488.1-201ENST00000507834 756 ntBASIC17.4■□□□□ 0.38
EDF1O60869 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.4■□□□□ 0.38
EDF1O60869 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.4■□□□□ 0.38
EDF1O60869 AC008687.5-201ENST00000593746 558 ntBASIC17.4■□□□□ 0.38
EDF1O60869 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.4■□□□□ 0.38
EDF1O60869 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
EDF1O60869 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.4■□□□□ 0.38
EDF1O60869 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EDF1O60869 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
EDF1O60869 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.39■□□□□ 0.38
EDF1O60869 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
EDF1O60869 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.39■□□□□ 0.38
EDF1O60869 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.39■□□□□ 0.37
EDF1O60869 AC092171.3-201ENST00000610122 2651 ntBASIC17.39■□□□□ 0.37
EDF1O60869 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.39■□□□□ 0.37
EDF1O60869 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.39■□□□□ 0.37
EDF1O60869 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
EDF1O60869 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EDF1O60869 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
EDF1O60869 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EDF1O60869 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EDF1O60869 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EDF1O60869 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EDF1O60869 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.39■□□□□ 0.37
EDF1O60869 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EDF1O60869 AC005104.2-201ENST00000427818 678 ntBASIC17.39■□□□□ 0.37
EDF1O60869 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.39■□□□□ 0.37
EDF1O60869 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.39■□□□□ 0.37
EDF1O60869 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.39■□□□□ 0.37
EDF1O60869 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.39■□□□□ 0.37
EDF1O60869 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.39■□□□□ 0.37
EDF1O60869 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
EDF1O60869 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.39■□□□□ 0.37
EDF1O60869 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EDF1O60869 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EDF1O60869 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
EDF1O60869 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
EDF1O60869 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
EDF1O60869 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
EDF1O60869 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EDF1O60869 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.39■□□□□ 0.37
EDF1O60869 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.39■□□□□ 0.37
EDF1O60869 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
EDF1O60869 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
EDF1O60869 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EDF1O60869 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
EDF1O60869 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
EDF1O60869 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
EDF1O60869 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EDF1O60869 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
EDF1O60869 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EDF1O60869 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EDF1O60869 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.38■□□□□ 0.37
EDF1O60869 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
EDF1O60869 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.38■□□□□ 0.37
EDF1O60869 AL596257.1-201ENST00000641463 2694 ntBASIC17.38■□□□□ 0.37
EDF1O60869 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.38■□□□□ 0.37
EDF1O60869 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EDF1O60869 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.38■□□□□ 0.37
EDF1O60869 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EDF1O60869 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EDF1O60869 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms