Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GFRA3O60609 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GFRA3O60609 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.02■□□□□ 0.31
GFRA3O60609 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GFRA3O60609 AL049757.1-201ENST00000616842 1596 ntBASIC17.02■□□□□ 0.31
GFRA3O60609 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GFRA3O60609 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GFRA3O60609 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GFRA3O60609 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.01■□□□□ 0.31
GFRA3O60609 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GFRA3O60609 AC073314.1-201ENST00000568729 2216 ntBASIC17.01■□□□□ 0.31
GFRA3O60609 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GFRA3O60609 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GFRA3O60609 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GFRA3O60609 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GFRA3O60609 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GFRA3O60609 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.01■□□□□ 0.31
GFRA3O60609 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GFRA3O60609 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GFRA3O60609 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GFRA3O60609 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GFRA3O60609 AC104794.3-201ENST00000566840 1248 ntBASIC17.01■□□□□ 0.31
GFRA3O60609 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.01■□□□□ 0.31
GFRA3O60609 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GFRA3O60609 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GFRA3O60609 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GFRA3O60609 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.01■□□□□ 0.31
GFRA3O60609 MYLKP1-201ENST00000509077 1580 ntBASIC17.01■□□□□ 0.31
GFRA3O60609 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GFRA3O60609 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GFRA3O60609 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
GFRA3O60609 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GFRA3O60609 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GFRA3O60609 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GFRA3O60609 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
GFRA3O60609 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GFRA3O60609 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.01■□□□□ 0.31
GFRA3O60609 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
GFRA3O60609 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17■□□□□ 0.31
GFRA3O60609 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17■□□□□ 0.31
GFRA3O60609 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17■□□□□ 0.31
GFRA3O60609 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17■□□□□ 0.31
GFRA3O60609 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
GFRA3O60609 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GFRA3O60609 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GFRA3O60609 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
GFRA3O60609 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GFRA3O60609 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
GFRA3O60609 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GFRA3O60609 DGCR5-201ENST00000399539 862 ntBASIC17■□□□□ 0.31
GFRA3O60609 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17■□□□□ 0.31
GFRA3O60609 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17■□□□□ 0.31
GFRA3O60609 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17■□□□□ 0.31
GFRA3O60609 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17■□□□□ 0.31
GFRA3O60609 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17■□□□□ 0.31
GFRA3O60609 LINC00982-205ENST00000420957 435 ntBASIC17■□□□□ 0.31
GFRA3O60609 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17■□□□□ 0.31
GFRA3O60609 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17■□□□□ 0.31
GFRA3O60609 LINC01225-203ENST00000563550 1244 ntBASIC17■□□□□ 0.31
GFRA3O60609 MIR4259-201ENST00000584466 101 ntBASIC17■□□□□ 0.31
GFRA3O60609 AC099568.2-201ENST00000609194 695 ntBASIC17■□□□□ 0.31
GFRA3O60609 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17■□□□□ 0.31
GFRA3O60609 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17■□□□□ 0.31
GFRA3O60609 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17■□□□□ 0.31
GFRA3O60609 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17■□□□□ 0.31
GFRA3O60609 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GFRA3O60609 AL157384.1-201ENST00000445995 2473 ntBASIC16.99■□□□□ 0.31
GFRA3O60609 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
GFRA3O60609 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.99■□□□□ 0.31
GFRA3O60609 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
GFRA3O60609 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
GFRA3O60609 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.99■□□□□ 0.31
GFRA3O60609 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.99■□□□□ 0.31
GFRA3O60609 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.99■□□□□ 0.31
GFRA3O60609 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GFRA3O60609 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
GFRA3O60609 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
GFRA3O60609 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
GFRA3O60609 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.99■□□□□ 0.31
GFRA3O60609 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.99■□□□□ 0.31
GFRA3O60609 ALG1L8P-201ENST00000533887 760 ntBASIC16.99■□□□□ 0.31
GFRA3O60609 MIR4453-201ENST00000584019 89 ntBASIC16.99■□□□□ 0.31
GFRA3O60609 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
GFRA3O60609 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.99■□□□□ 0.31
GFRA3O60609 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
GFRA3O60609 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GFRA3O60609 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GFRA3O60609 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.99■□□□□ 0.31
GFRA3O60609 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GFRA3O60609 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GFRA3O60609 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GFRA3O60609 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GFRA3O60609 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
GFRA3O60609 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
GFRA3O60609 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GFRA3O60609 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GFRA3O60609 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GFRA3O60609 KRT223P-202ENST00000449164 1292 ntBASIC16.98■□□□□ 0.31
GFRA3O60609 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.98■□□□□ 0.31
GFRA3O60609 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms