Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
FOXD2O60548 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
FOXD2O60548 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXD2O60548 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
FOXD2O60548 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXD2O60548 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXD2O60548 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXD2O60548 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXD2O60548 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
FOXD2O60548 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXD2O60548 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXD2O60548 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXD2O60548 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXD2O60548 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXD2O60548 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXD2O60548 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXD2O60548 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXD2O60548 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXD2O60548 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXD2O60548 AC007967.2-201ENST00000432613 625 ntBASIC17.79■□□□□ 0.44
FOXD2O60548 AC009947.1-201ENST00000444350 727 ntBASIC17.79■□□□□ 0.44
FOXD2O60548 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXD2O60548 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXD2O60548 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXD2O60548 AP002472.1-201ENST00000577490 586 ntBASIC17.79■□□□□ 0.44
FOXD2O60548 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXD2O60548 AC090164.3-201ENST00000610780 2143 ntBASIC17.79■□□□□ 0.44
FOXD2O60548 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXD2O60548 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXD2O60548 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXD2O60548 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXD2O60548 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
FOXD2O60548 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
FOXD2O60548 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXD2O60548 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXD2O60548 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXD2O60548 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
FOXD2O60548 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
FOXD2O60548 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXD2O60548 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXD2O60548 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXD2O60548 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXD2O60548 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXD2O60548 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
FOXD2O60548 AL354751.1-201ENST00000412768 1863 ntBASIC17.78■□□□□ 0.44
FOXD2O60548 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
FOXD2O60548 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXD2O60548 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXD2O60548 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXD2O60548 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXD2O60548 MIR770-201ENST00000390219 98 ntBASIC17.78■□□□□ 0.44
FOXD2O60548 AC023274.1-201ENST00000418278 595 ntBASIC17.78■□□□□ 0.44
FOXD2O60548 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXD2O60548 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.78■□□□□ 0.44
FOXD2O60548 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.78■□□□□ 0.44
FOXD2O60548 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.78■□□□□ 0.44
FOXD2O60548 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXD2O60548 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.78■□□□□ 0.44
FOXD2O60548 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.78■□□□□ 0.44
FOXD2O60548 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
FOXD2O60548 AC005593.1-201ENST00000624894 515 ntBASIC17.78■□□□□ 0.44
FOXD2O60548 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXD2O60548 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXD2O60548 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
FOXD2O60548 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXD2O60548 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXD2O60548 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXD2O60548 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXD2O60548 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
FOXD2O60548 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXD2O60548 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXD2O60548 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
FOXD2O60548 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXD2O60548 AC009053.2-201ENST00000563701 2365 ntBASIC17.77■□□□□ 0.44
FOXD2O60548 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXD2O60548 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXD2O60548 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXD2O60548 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXD2O60548 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXD2O60548 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXD2O60548 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
FOXD2O60548 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXD2O60548 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXD2O60548 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
FOXD2O60548 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXD2O60548 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXD2O60548 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXD2O60548 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXD2O60548 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXD2O60548 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXD2O60548 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.77■□□□□ 0.44
FOXD2O60548 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.77■□□□□ 0.44
FOXD2O60548 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXD2O60548 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.77■□□□□ 0.44
FOXD2O60548 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXD2O60548 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.77■□□□□ 0.44
FOXD2O60548 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXD2O60548 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
FOXD2O60548 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
FOXD2O60548 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms