Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
GRIN3BO60391 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
GRIN3BO60391 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GRIN3BO60391 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
GRIN3BO60391 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GRIN3BO60391 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
GRIN3BO60391 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
GRIN3BO60391 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.37■■□□□ 1.01
GRIN3BO60391 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GRIN3BO60391 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
GRIN3BO60391 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GRIN3BO60391 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
GRIN3BO60391 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GRIN3BO60391 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GRIN3BO60391 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GRIN3BO60391 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC21.36■■□□□ 1.01
GRIN3BO60391 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GRIN3BO60391 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC21.36■■□□□ 1.01
GRIN3BO60391 SPCS2P4-201ENST00000436160 681 ntBASIC21.36■■□□□ 1.01
GRIN3BO60391 SPTLC1P1-201ENST00000447199 261 ntBASIC21.36■■□□□ 1.01
GRIN3BO60391 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC21.36■■□□□ 1.01
GRIN3BO60391 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC21.36■■□□□ 1.01
GRIN3BO60391 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
GRIN3BO60391 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
GRIN3BO60391 SSH2-210ENST00000582084 560 ntTSL 3 BASIC21.36■■□□□ 1.01
GRIN3BO60391 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC21.36■■□□□ 1.01
GRIN3BO60391 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GRIN3BO60391 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
GRIN3BO60391 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GRIN3BO60391 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GRIN3BO60391 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
GRIN3BO60391 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GRIN3BO60391 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GRIN3BO60391 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GRIN3BO60391 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GRIN3BO60391 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
GRIN3BO60391 AC138969.3-201ENST00000546612 1459 ntBASIC21.35■■□□□ 1.01
GRIN3BO60391 AC138932.2-201ENST00000548268 1459 ntBASIC21.35■■□□□ 1.01
GRIN3BO60391 AC126755.4-201ENST00000549796 1459 ntBASIC21.35■■□□□ 1.01
GRIN3BO60391 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC21.35■■□□□ 1.01
GRIN3BO60391 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
GRIN3BO60391 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
GRIN3BO60391 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GRIN3BO60391 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC21.35■■□□□ 1.01
GRIN3BO60391 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC21.35■■□□□ 1.01
GRIN3BO60391 MIR6080-201ENST00000617359 66 ntBASIC21.35■■□□□ 1.01
GRIN3BO60391 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GRIN3BO60391 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
GRIN3BO60391 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
GRIN3BO60391 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.35■■□□□ 1.01
GRIN3BO60391 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.35■■□□□ 1.01
GRIN3BO60391 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GRIN3BO60391 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GRIN3BO60391 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GRIN3BO60391 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.35■■□□□ 1.01
GRIN3BO60391 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GRIN3BO60391 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.35■■□□□ 1.01
GRIN3BO60391 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GRIN3BO60391 UXT-AS1-201ENST00000590504 1525 ntBASIC21.34■■□□□ 1.01
GRIN3BO60391 AC125437.2-201ENST00000625180 2167 ntBASIC21.34■■□□□ 1.01
GRIN3BO60391 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.34■■□□□ 1.01
GRIN3BO60391 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
GRIN3BO60391 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
GRIN3BO60391 AC018445.3-201ENST00000624177 1945 ntBASIC21.34■■□□□ 1.01
GRIN3BO60391 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GRIN3BO60391 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC21.34■■□□□ 1.01
GRIN3BO60391 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC21.34■■□□□ 1.01
GRIN3BO60391 ACA64.2-201ENST00000459014 129 ntBASIC21.34■■□□□ 1.01
GRIN3BO60391 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
GRIN3BO60391 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GRIN3BO60391 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GRIN3BO60391 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.34■■□□□ 1.01
GRIN3BO60391 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.34■■□□□ 1.01
GRIN3BO60391 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.34■■□□□ 1.01
GRIN3BO60391 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GRIN3BO60391 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
GRIN3BO60391 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.33■■□□□ 1.01
GRIN3BO60391 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
GRIN3BO60391 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GRIN3BO60391 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
GRIN3BO60391 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
GRIN3BO60391 STK19B-204ENST00000512515 211 ntBASIC21.33■■□□□ 1.01
GRIN3BO60391 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC21.33■■□□□ 1.01
GRIN3BO60391 CDK4-206ENST00000549606 558 ntTSL 2 BASIC21.33■■□□□ 1.01
GRIN3BO60391 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GRIN3BO60391 AC084121.4-201ENST00000641598 221 ntBASIC21.33■■□□□ 1.01
GRIN3BO60391 AF228730.8-201ENST00000642140 221 ntBASIC21.33■■□□□ 1.01
GRIN3BO60391 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GRIN3BO60391 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GRIN3BO60391 AL133338.1-201ENST00000565695 1517 ntBASIC21.33■■□□□ 1
GRIN3BO60391 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.33■■□□□ 1
GRIN3BO60391 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
GRIN3BO60391 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
GRIN3BO60391 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
GRIN3BO60391 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
GRIN3BO60391 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.33■■□□□ 1
GRIN3BO60391 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.32■■□□□ 1
GRIN3BO60391 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GRIN3BO60391 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.32■■□□□ 1
GRIN3BO60391 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms