Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 AL049757.1-201ENST00000616842 1596 ntBASIC17.11■□□□□ 0.33
GDF9O60383 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDF9O60383 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF9O60383 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF9O60383 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
GDF9O60383 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF9O60383 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF9O60383 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDF9O60383 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GDF9O60383 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF9O60383 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF9O60383 OR8S1-201ENST00000310194 1080 ntBASIC17.1■□□□□ 0.33
GDF9O60383 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDF9O60383 KLF4P1-201ENST00000412782 1185 ntBASIC17.1■□□□□ 0.33
GDF9O60383 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GDF9O60383 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF9O60383 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
GDF9O60383 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.1■□□□□ 0.33
GDF9O60383 AC051619.7-201ENST00000568314 623 ntBASIC17.1■□□□□ 0.33
GDF9O60383 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.1■□□□□ 0.33
GDF9O60383 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.1■□□□□ 0.33
GDF9O60383 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.1■□□□□ 0.33
GDF9O60383 LINC02560-201ENST00000596379 459 ntBASIC17.1■□□□□ 0.33
GDF9O60383 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.1■□□□□ 0.33
GDF9O60383 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.1■□□□□ 0.33
GDF9O60383 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF9O60383 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDF9O60383 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF9O60383 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GDF9O60383 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF9O60383 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF9O60383 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GDF9O60383 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDF9O60383 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDF9O60383 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDF9O60383 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDF9O60383 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDF9O60383 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDF9O60383 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDF9O60383 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.09■□□□□ 0.33
GDF9O60383 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.09■□□□□ 0.33
GDF9O60383 AP002414.1-201ENST00000391405 1147 ntBASIC17.09■□□□□ 0.33
GDF9O60383 COX5BP2-201ENST00000392354 334 ntBASIC17.09■□□□□ 0.33
GDF9O60383 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.09■□□□□ 0.33
GDF9O60383 ADH5P3-201ENST00000433842 1137 ntBASIC17.09■□□□□ 0.33
GDF9O60383 CNN2P2-201ENST00000443536 909 ntBASIC17.09■□□□□ 0.33
GDF9O60383 CNN2P3-201ENST00000450201 906 ntBASIC17.09■□□□□ 0.33
GDF9O60383 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.09■□□□□ 0.33
GDF9O60383 CXCL1P1-201ENST00000502804 216 ntBASIC17.09■□□□□ 0.33
GDF9O60383 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.09■□□□□ 0.33
GDF9O60383 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.09■□□□□ 0.33
GDF9O60383 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.09■□□□□ 0.33
GDF9O60383 AL136317.3-201ENST00000618497 906 ntBASIC17.09■□□□□ 0.33
GDF9O60383 AC008761.3-201ENST00000624803 892 ntBASIC17.09■□□□□ 0.33
GDF9O60383 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.09■□□□□ 0.33
GDF9O60383 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
GDF9O60383 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDF9O60383 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GDF9O60383 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDF9O60383 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDF9O60383 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.09■□□□□ 0.33
GDF9O60383 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
GDF9O60383 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GDF9O60383 AC126763.1-201ENST00000552015 2118 ntBASIC17.09■□□□□ 0.33
GDF9O60383 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.09■□□□□ 0.33
GDF9O60383 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GDF9O60383 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
GDF9O60383 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.09■□□□□ 0.33
GDF9O60383 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.08■□□□□ 0.33
GDF9O60383 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GDF9O60383 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
GDF9O60383 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GDF9O60383 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.08■□□□□ 0.33
GDF9O60383 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.08■□□□□ 0.33
GDF9O60383 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GDF9O60383 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
GDF9O60383 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.08■□□□□ 0.32
GDF9O60383 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.08■□□□□ 0.32
GDF9O60383 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.08■□□□□ 0.32
GDF9O60383 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.08■□□□□ 0.32
GDF9O60383 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.08■□□□□ 0.32
GDF9O60383 AC005237.2-201ENST00000434368 219 ntBASIC17.08■□□□□ 0.32
GDF9O60383 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.08■□□□□ 0.32
GDF9O60383 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.08■□□□□ 0.32
GDF9O60383 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.08■□□□□ 0.32
GDF9O60383 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.08■□□□□ 0.32
GDF9O60383 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.08■□□□□ 0.32
GDF9O60383 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.08■□□□□ 0.32
GDF9O60383 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
GDF9O60383 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.08■□□□□ 0.32
GDF9O60383 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
GDF9O60383 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
GDF9O60383 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GDF9O60383 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GDF9O60383 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.08■□□□□ 0.32
GDF9O60383 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF9O60383 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GDF9O60383 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.07■□□□□ 0.32
GDF9O60383 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GDF9O60383 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms