Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EXTL3O43909 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
EXTL3O43909 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EXTL3O43909 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EXTL3O43909 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.16■□□□□ 0.66
EXTL3O43909 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EXTL3O43909 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EXTL3O43909 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EXTL3O43909 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EXTL3O43909 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EXTL3O43909 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.16■□□□□ 0.66
EXTL3O43909 AC132008.2-207ENST00000454517 770 ntBASIC19.16■□□□□ 0.66
EXTL3O43909 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.16■□□□□ 0.66
EXTL3O43909 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EXTL3O43909 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
EXTL3O43909 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.16■□□□□ 0.66
EXTL3O43909 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.16■□□□□ 0.66
EXTL3O43909 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
EXTL3O43909 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.16■□□□□ 0.66
EXTL3O43909 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EXTL3O43909 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.16■□□□□ 0.66
EXTL3O43909 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.16■□□□□ 0.66
EXTL3O43909 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EXTL3O43909 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EXTL3O43909 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.16■□□□□ 0.66
EXTL3O43909 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EXTL3O43909 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
EXTL3O43909 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EXTL3O43909 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
EXTL3O43909 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EXTL3O43909 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
EXTL3O43909 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
EXTL3O43909 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
EXTL3O43909 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EXTL3O43909 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.15■□□□□ 0.66
EXTL3O43909 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
EXTL3O43909 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
EXTL3O43909 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EXTL3O43909 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
EXTL3O43909 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.15■□□□□ 0.66
EXTL3O43909 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.15■□□□□ 0.66
EXTL3O43909 ABCD1P5-201ENST00000445663 754 ntBASIC19.15■□□□□ 0.66
EXTL3O43909 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.15■□□□□ 0.66
EXTL3O43909 FDX1P1-201ENST00000449115 551 ntBASIC19.15■□□□□ 0.66
EXTL3O43909 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.15■□□□□ 0.66
EXTL3O43909 UNC93B7-201ENST00000509439 705 ntBASIC19.15■□□□□ 0.66
EXTL3O43909 IGHV3-52-201ENST00000519770 353 ntBASIC19.15■□□□□ 0.66
EXTL3O43909 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
EXTL3O43909 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
EXTL3O43909 AC111152.3-201ENST00000569699 673 ntBASIC19.15■□□□□ 0.66
EXTL3O43909 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
EXTL3O43909 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EXTL3O43909 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.15■□□□□ 0.66
EXTL3O43909 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.15■□□□□ 0.66
EXTL3O43909 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EXTL3O43909 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EXTL3O43909 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.15■□□□□ 0.66
EXTL3O43909 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.15■□□□□ 0.66
EXTL3O43909 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
EXTL3O43909 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
EXTL3O43909 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EXTL3O43909 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
EXTL3O43909 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
EXTL3O43909 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
EXTL3O43909 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.14■□□□□ 0.65
EXTL3O43909 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
EXTL3O43909 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
EXTL3O43909 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
EXTL3O43909 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EXTL3O43909 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EXTL3O43909 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
EXTL3O43909 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
EXTL3O43909 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
EXTL3O43909 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.14■□□□□ 0.65
EXTL3O43909 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
EXTL3O43909 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.14■□□□□ 0.65
EXTL3O43909 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.14■□□□□ 0.65
EXTL3O43909 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
EXTL3O43909 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
EXTL3O43909 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.14■□□□□ 0.65
EXTL3O43909 LINC01711-201ENST00000598340 967 ntBASIC19.14■□□□□ 0.65
EXTL3O43909 AP000867.4-201ENST00000641616 219 ntBASIC19.14■□□□□ 0.65
EXTL3O43909 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.14■□□□□ 0.65
EXTL3O43909 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
EXTL3O43909 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EXTL3O43909 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
EXTL3O43909 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EXTL3O43909 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
EXTL3O43909 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.14■□□□□ 0.65
EXTL3O43909 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
EXTL3O43909 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
EXTL3O43909 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EXTL3O43909 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
EXTL3O43909 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EXTL3O43909 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
EXTL3O43909 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.14■□□□□ 0.65
EXTL3O43909 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
EXTL3O43909 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.13■□□□□ 0.65
EXTL3O43909 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.13■□□□□ 0.65
EXTL3O43909 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms